Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114563732

GI number:

Start: 3068857

End: 3071340

Strand: Reverse

Name: Not Available

Synonym: Sfri_2566

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563733

Following gene: 114563730

Centisome position: NA

GC content: NA

Gene sequence:

>2484_bases
ATGGAGTGGCAAATTGCGTGGAGATTGTTTAAACGTGAACTCGCTCAAGGGCAATTAATTCTTATCGTGTTGGCTATTAC
GTTAGCGGTGTTGTCCGTTACCGGGCTAGCGCGGGTTAGTGAGCGTTTACAAGTGGCCATTAATGGCGAAGCCTCTAACT
TTATTGCCGCTGACCGTATTATTGACTCTCCGGTTGAACTTGATTCACAAGTCCTTACTGTTGCCGATGAGTTAGGCCTT
GCCCACGTCACTAACATGCAATTTAACTCGATGGTGTATTCGGGCGATAAATTTCAATTAGTGACCGTTAAAGCAGTAGG
TGAGGGCTATCCGTTAAAAGGCGATATAGAGCTGAGTAACGGTGTCACTCGAGCATTACCAAGCAAGGGACAAGCATGGT
TTGAAAATCGCTTAGGTGGTTTGCTTGGCTACCCTAAAAGCATTGAATTGGGTAATAGTGAGTTATCGCTAACCGAAGAG
ATTAGTCGTTTACCGGATGCGGGGTTTAATCCGTTTGCGTCTTCACCAGTATTACTCATCCGTTTAGATGATGTGGCGGC
GACGGGTATTATTCAACCCGGTAGTCGGGTGACGTATTTATACCAATTTACTGGTAATGCAGAGCAATTAACCGCATTTG
AACTGCAAGCTAAACCTTTGCTCAATAACAGTCAACGTTGGGTCGATGTGCAATCGGGAGATTCCCCGATAGCTTCAGCT
GTGCAACGTGCGGAGCGTTTTTTACTGCTAGCCAGTTTACTTGGGATTGCCTTGGCGTGCGCTGCCATTGGTATTGCAGC
ACAGCGTTACTGCCAACGCCATTATGATGTTGTGGCCATGCTGAAAACCTTTGGCGCTTCAGGCAAGCAAATTCGGGTGT
TATTCGGACTGCATTTGTCGTTAGTGACCTTGTTGGGTATTGTACTGGGGTTACTGGGCGGGTTATTGCTCGACATTGGC
ATTACGGCATTTTTACCACCAGAAATAGCAGCTTATTCTCCACCGTATTTACGCCCTGTTTTATTAGGTGTAAGCACGGG
ACTGATCAGTGCATTTATGTTTTCTGCTTATCCGTTAATGCGGCTGTTAGCCATTCCGCCATTAAGAGTATTGCAGCGCC
AATTAGAAGGCTTGCAGCTGGGCATGTGGCTCCATTTACTATTAAGCTTGGCCGCAATGGCCTTGTTGGGGTATTTGTAT
TCAAGAAGTTTAGCATTGACGATGACAGTGGTACTTGCAGTATTATTGTTAGGTTTTTTACTCAGTGTGCTGGGCTTTGT
GATGATCCGTTTTGGTCATGGCATTGGCATGAAAACCACCAATCCTTTTCAATTAGCACTAGCCGGTCTGCGTCGTCGAG
CTCGTCAAAATGCTGTGCAATTGGTTGGATTTAGCAGTGCATTGGTATTATTGCTAACCATCTTGGCTTTGCGTCAAGAT
TTACTCAATGAATGGCAAAAGCAGTTACCAGAAAATGCACCTAACTACTTTCTAGTTAATATTGCCCCTGAGGATGCTAA
GCCGTTAAACGACTTTTTAAGCCTAAATCATATTAACGCGACTGATATTTATCCTGTGGTGCGCGGTCGACTCACTCATA
TAAATGACGAAGAATTGATTTCAGGTAAACAAGCTGAAAACGGTGCTGAAGGGCGAGTGGGGATTTCTCGCGAACTAAAC
TTGACCTATCGAGATACTTTACCGCCAAATAATAAGTTGCTTGAGGGCAAGTTTAATCAAGCTGCTGATGATGTTTCGGT
TGAGTCCGGTGTCGCTGATAGGCTAGGAATTATACTTGGCGACAAGCTCACTTATAGCATCGATAATCAATCATTTTCGG
TGAAGGTTGCCAGTATTAGACAGGTCCAGTGGGAAACCCTACAACCTAACTTTTACATGATATTCACCCCTGAAGCGTTG
GCGCCATTTGCCTATACTTCGATGGCCAGTTTTCACCTTAATGATGCGCAATTAGCGGCGGATGGTAGCTTACTGAGCGC
CAATCAAGTGGTATTACAACTAATCCAACAATTTCCAACAATATCGATTATTGATGTTGGGGCGATGGTTGAGCAGTTGC
GACAAATTATCGATCAAGTGTCGTTGTCATTGTCATTGGTGTTGGCATTAGTGTTGTTGGCCAGTGCTTTGGTGTTGATT
GCGCAAACGGAAGCTGGCATGGCGACTCGACAACGAGAACTCGCGGTGTTGCGAACTTTTGGCGCATCGGGTTGGTTACT
TCGTGCTTCTACTGGAATTGAGTTTGCTTTGCTTGGTGCAATTGCCGGTTTATTAGCGGTGATTGTGGCAGAATTTGCTT
TATACATGTTAAAAACTCAAGTGTTTGAGCTGGTTGTATATATGCATTGGCCGTGGTGGGCGATTACTCCAGTCGCAGGG
GCGGTAATTGTGGCTATTTTAGGTGTTTGGCGTTGTCGACAGTTATTGAATATGTCTTGCAGTGAGATGCTAAAAGCGGG
TTAA

Upstream 100 bases:

>100_bases
CACGCCAATTAGTGATGGAGAATGGTCATTTATCTGAACCATACGCAGATAATCTGAAGGCTGCCCATGTGAGCGCGGAA
CATGCTGAGGAGGTTAACTA

Downstream 100 bases:

>100_bases
AACACCGGCTAAAAGTATAAAAGGGAGATGCTTAGTCATCTCCCTTTTTTACATTAGTTGATATGGCTACTTTGATCGCA
TTTTATATTGGGTTGGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>827_residues
MEWQIAWRLFKRELAQGQLILIVLAITLAVLSVTGLARVSERLQVAINGEASNFIAADRIIDSPVELDSQVLTVADELGL
AHVTNMQFNSMVYSGDKFQLVTVKAVGEGYPLKGDIELSNGVTRALPSKGQAWFENRLGGLLGYPKSIELGNSELSLTEE
ISRLPDAGFNPFASSPVLLIRLDDVAATGIIQPGSRVTYLYQFTGNAEQLTAFELQAKPLLNNSQRWVDVQSGDSPIASA
VQRAERFLLLASLLGIALACAAIGIAAQRYCQRHYDVVAMLKTFGASGKQIRVLFGLHLSLVTLLGIVLGLLGGLLLDIG
ITAFLPPEIAAYSPPYLRPVLLGVSTGLISAFMFSAYPLMRLLAIPPLRVLQRQLEGLQLGMWLHLLLSLAAMALLGYLY
SRSLALTMTVVLAVLLLGFLLSVLGFVMIRFGHGIGMKTTNPFQLALAGLRRRARQNAVQLVGFSSALVLLLTILALRQD
LLNEWQKQLPENAPNYFLVNIAPEDAKPLNDFLSLNHINATDIYPVVRGRLTHINDEELISGKQAENGAEGRVGISRELN
LTYRDTLPPNNKLLEGKFNQAADDVSVESGVADRLGIILGDKLTYSIDNQSFSVKVASIRQVQWETLQPNFYMIFTPEAL
APFAYTSMASFHLNDAQLAADGSLLSANQVVLQLIQQFPTISIIDVGAMVEQLRQIIDQVSLSLSLVLALVLLASALVLI
AQTEAGMATRQRELAVLRTFGASGWLLRASTGIEFALLGAIAGLLAVIVAEFALYMLKTQVFELVVYMHWPWWAITPVAG
AVIVAILGVWRCRQLLNMSCSEMLKAG

Sequences:
NA

Specific function: NA

COG id: COG3127

COG function: function code Q; Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA