Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 114563327

GI number:

Start: 2567169

End: 2568746

Strand: Reverse

Name: Not Available

Synonym: Sfri_2156

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563332

Following gene: 114563326

Centisome position: NA

GC content: NA

Gene sequence:

>1578_bases
ATGTCGACGAATACCACATCTCACTCTACAACTCATTCAACTATATCTAGTCAAGCTGTCGTGATTAAACAAGCTGACTT
TATTGAAAGTATTGCTGATTCTCTGCAATACATTTCGTATTACCATCCCAAAGACTTTGTTGATGCGATGACCAAAGCTT
ACGAGCGTGAAGAAAGCGCTGCCGCTAAAGACGCCATTGCTCAAATTCTGATTAACTCCCGCATGTCAGCCGAAGGCAAA
CGCCCTTTATGCCAAGACACTGGAATTGTCACCACCTTTGTTAAAATTGGTATGTCTGTTCAGTGGGATAAAACTGACAT
GACAGTTCAAGAAATGGTCGATGAAGGTGTACGTCGTGCTTACACCAATCCAGATAATCCATTACGTGCATCAATAGTGT
CAGATCCTGCCGGTGCGCGTAAAAATACTAAAGACAACACACCATCAGTGGTTCATATTGACATGGTTGCTGGTAATCAA
ATAGAAGTGATGATTGCAGCCAAAGGTGGTGGGTCGGAAAATAAATCCAAAATGGCCATGCTTAATCCGTCAGACGATAT
CGCCGCTTGGGTAGAAAAAACATTACCAACAATGGGCGCGGGCTGGTGTCCACCGGGTATGTTAGGCATAGGTATCGGTG
GTACTGCTGAGAAAGCGGCCGTTCTGGCCAAAGAATCATTAATGGACCCTGTTGATATTCATGAGTTGATGGCTCGTGGT
GCAGAGACCACAGAAGAAAAGCTTCGTTTAGACATTTTTGAACGGGCAAATAACTTAGGCATAGGCGCTCAAGGGTTGGG
CGGATTAACCACAGTATTAGACGTTAAAATTAAATCTGTACCGACTCATGCAGCGTCTAAACCAGTAGTGATGATCCCTA
ACTGCGCAGCAACGCGCCATGTGCATTTTCATTTAGATGGCACTGGTCCAGTCGATTTAGTACCACCATCGTTGTCTGAT
TGGCCTGAAATTACTCGTGAAGCGGGAGAAAACACTCACCGTGTCAATTTAGATACGGTCACTCAAGCTGAAATCGAAAC
TTGGAAGAGTGGTGATACCTTATTACTCAACGGTAAAATGCTGACTGGCCGCGATGCAGCTCATAAACGGATTCAAATGT
TGCTTGAATCTGGTGAAGGTTTACCAGCAGGTGTCGATTTTACCGGTAAGTTTATTTATTACGTTGGCCCAGTCGATCCA
GTCGGTGATGAAGTGGTTGGCCCTGCAGGCCCAACAACGGCAACCCGTATGGATAAGTTCACTGACATGATGTTAGACCA
AACAGGCCTAATGGGCATGATTGGTAAGTCTGAGCGTGGTCCTGAAACGGTTGCTTCAATTAAAAAGCACAAAGCAGTCT
ATTTAATGGCTGTTGGCGGCGCTGCATACCTAGTGTCGAAAGCGATTAAGAAATCACGTGTTGTCGCATTTGAAGATTTA
GGCATGGAAGCGATTTACGAATTTGATGTGCAAGACATGCCAGTGACCGTGGCGGTTGATACCAATGGTGTTAATGCGCA
CGAAACTGGCCCAGCGATTTGGAAAATTAACATCGCTAACAGTAAAGCTAATAAGTAA

Upstream 100 bases:

>100_bases
GATGGAAAGAGTATCATATTGGTCTTAATAGTTAATATTAAATCGATTCTAATAAAAACGATAACCATGTTAGGCCGCAA
TGGCTGCTGGAGCACCCCAT

Downstream 100 bases:

>100_bases
GCCATCGATAACATTGTGCTTAGACATAAGCGATAAGTGTCAATGTGATTAAACGCTCGGGTTTACAGCTTTTTACAAAA
GGCTTGTTGCCTGAGCGTTT

Product: tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>525_residues
MSTNTTSHSTTHSTISSQAVVIKQADFIESIADSLQYISYYHPKDFVDAMTKAYEREESAAAKDAIAQILINSRMSAEGK
RPLCQDTGIVTTFVKIGMSVQWDKTDMTVQEMVDEGVRRAYTNPDNPLRASIVSDPAGARKNTKDNTPSVVHIDMVAGNQ
IEVMIAAKGGGSENKSKMAMLNPSDDIAAWVEKTLPTMGAGWCPPGMLGIGIGGTAEKAAVLAKESLMDPVDIHELMARG
AETTEEKLRLDIFERANNLGIGAQGLGGLTTVLDVKIKSVPTHAASKPVVMIPNCAATRHVHFHLDGTGPVDLVPPSLSD
WPEITREAGENTHRVNLDTVTQAEIETWKSGDTLLLNGKMLTGRDAAHKRIQMLLESGEGLPAGVDFTGKFIYYVGPVDP
VGDEVVGPAGPTTATRMDKFTDMMLDQTGLMGMIGKSERGPETVASIKKHKAVYLMAVGGAAYLVSKAIKKSRVVAFEDL
GMEAIYEFDVQDMPVTVAVDTNGVNAHETGPAIWKINIANSKANK

Sequences:
NA

Specific function: NA

COG id: COG1951

COG function: function code C; Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA