Definition | Shewanella frigidimarina NCIMB 400, complete genome. |
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Accession | NC_008345 |
Length | 4,845,257 |
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Identifier: 114562681
GI number:
Start: 1794291
End: 1797107
Strand: Direct
Name: Not Available
Synonym: Sfri_1505
Alternate gene names: NA
Gene position: NA
Preceding gene: 114562680
Following gene: 114562682
Centisome position: NA
GC content: NA
Gene sequence:
>2817_bases ATGTCAGTGGTCCAATCAAGTTGTGCTTATTGTGGTGTCGGATGCGGTGTTAGCGTGTCTTCAAATAAACCGAATTGGAC CGATGTCGATGCTGCAGATTTAATACTAGTCGGTGACAACAAGCATCCAGCTAATTACGGTCATTTATGTGCCAAAGGTG AACGCTTACTCGACAGTTTAGCCCAACCCAATGTACTGCGTTACCCTAAACTTCGTTCTGGTATGCCACTTGATTGGGAC AAGGCGAGCACCTTAATTGCTGATACCTTTGCGAAAACCATTGCAGAACATGGTCCAGATTCAGTCGCACTGTATCTTTC TGGCCAATTACTCACTGAAGATTATTATGTTGCCAACAAGTTTGCTAAAGGCTTTTTAAAAACGGCTAACGTCGATACTA ACTCACGCTTATGTATGTCGTCAGCGGTGAGCGCAATGCAGCGTGCCTTTGGTGAAGATGTAGTTCCTGGATGTTACGAC GATCTAGAGCAAGCTGATGTGATAGTGCTTGTAGGGGCCAATACCGCTTGGACTCATCCCGTTCTTTTTCAAAGAATTTT AGCCGCAATAAAAGCCAATAATGCTCAGTTAGTGGTAATCGACCCGTTATCAACAGCCACAGCAAAACAAGCAGACTTAC ATTTAGCCATTAAACCGGGCGCTGATTTAACATTATTTCATGGCTTACTCGGTTACCTAGCAGATCAAAATCGTGTCGAC CACGCGTATATTGCCGCACATACAGAAGGCTTTGATACTGTGGTTTTGCAGGCGCAACAATTAAGTGCCAATTTAGCCGA TCTTGCCACGCAAGTCGGTGTTTCAGTCACTCAGCTGACGCAATTCTATCAACTTGTAGCCAACAATAAAAAAGTACTTA CGGCATCTTGTCAGGGGGTTAATCAGTCAACCATTGGCACCGATGCAACCAATGCGATGATTAACTGCCACCTCGCGTTA GGGCACATTGGTCAAGCTGGTTGTGGTTTTTTTTCGTTAACAGGGCAGCCTAATGCCATGGGCGGTCGTGAGGTTGGTGG GTTGGCCACTCAGTTAGCATGCCATATGGGTTTTTCACAACCGGAGCAGCAGTTATTAGCTGATTTTTGGAAAGTTGATA GTATTGCGGATCAAAAAGGATTGGTTGCAGTTGAGATGTTTGATGCCCTTGCCGAAGGTAAAATCAAAGCGATTTGGATT ATGGGTACCAATCCTGTGGTGTCTTTACCCAACAGTGAAAAAATAGCACAAGCATTAGCCGATTGTCCTTTTGTGGTGGT GTCTGAAATCAGTCCTGATTCTGATACCGCCAAACTTGCTGATGTATTACTCCCAGCTCAAGGCTGGTCAGAAAAGTGCG GTACCGTCACTAATAGTGAGCGCACTATTACGCGTCAACGTGGCTTTATCACTGCCAAAGGGCAAGCTAAACCAGATTGG TGGGCCGTTAGCCAAGTAGCTAAGAAAATGGGCTTTGATGGTTTTGAGTTTGATGACAATGCCAGCATATTTAGCGAGTT TGCAGCCTTATCGGCGAAGGTTAAACAGGTTTTTCCAACTAAGGTGTTTGATCTCACTGGGCTAACAGAGTTATCCAAAG CGCAATATGATGCACTAGCACCGACGCAATGGCCTATTGCTTCGGCAACTCAAATTGGTCAACAAAACGTGCGTGTTTTC GGCCTAGGTGAATTTGCTACCGCGACGGGTAAAGCGCAGTTTGTTACGCCTGCGGTTGTTAGTGTTCCGCAACAATCATT ACCGAGTAACACCTTGTTATTAAACACTGGCCGAAGCCGAGATCAGTGGCATACCATGACTCGCACCGGACATATTGCTA GCTTACGAGCCAGTATTCCTGAGCCTGTCGTTCACCTGCATTCATCACAACTCAGTGCATTGTCGTTAACAGAAGGTGGC TTGGTCCGCATTGAAGCTATTCAAAATCAAATTGAACAATACTCCACAGAGACCGCTAACCCCGACCTTTTTACCCACGC CTCATTCACGATGGCTCGCGCTGTTGTCGATGATGACATACCGACAAATATGGCTTTGATGTCAATGCATTGGTCTGCAC AGTTTTCGCTGACAAAAGGCGTGAATCAAGCATTAGATGCACGTGTCGACCCAATATCAAAACAACCTGGGTTTAAGTGT CAACCCGTGACATTAACCCCTGTTGAACTTGCGCTGCAAGGGGTGGTTTTTGGTCAACACTACTCTTCTGCTCACGGGCT ATGTTGGCAAGTTGCACAAACGCTAGAGAACGGAGTGTGTCATCACATCGGTTTTACTGATACCGACGACGGCTTTGCGT ATCAAGCGACTGTGCATTCACTTAAGTGGACTTTAACGGTAGTTGGCCAGCCTTTATATATCCAATGTAATATGGATAAA GGATTACTTAAGGCATTAAAAGTATTGTCTCATACTCAAGTGAATGTGGCCCTATATCAGATGAATGATTTTATTGGTAA GCCTGTCGATAAACAGTTAATTAAACAGCTACATCAGCAAATAAAAGCCGGAAATAGTCCGTTAATCTGCGCTTGTACAG GGGTAACCGAAGCGAACATTAACGACGAAATCAATCAACAATTTAACGACCAAGTGATGAGTGACGGTTTAGCGAATATC AGTTTTGAGCAGGCGTTAGATAGCACCCAGTTATTACTCGGTTGCGGCCGTCAATGTGGCAGTTGTCATAGTGAAGTTAA GCAGTGTGCCAAGCAGAGTTGGAAAGATGCCTTATCTTATTGCGAATCTTATTCCGACATTGACCATCAACCATCAGTAG CAGAGGACGTAGCCTAA
Upstream 100 bases:
>100_bases ATCTAAATATCCATTTCTATTATAAATCAGTGAGTTAATTTTCTGGCACAGCTTTCGCAGTACCTTACCCATGAGATAGT CAAAGTGAAAGGGTAGATGT
Downstream 100 bases:
>100_bases TGAAAACAGTAGAAGCAATGATAAAAGGTCATCAATCTATAAATGCTTTAGGGCATGCCGCAAATGAATTACACGCGGGT GATGTGGCTATTGTTGGTGC
Product: molybdopterin oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>938_residues MSVVQSSCAYCGVGCGVSVSSNKPNWTDVDAADLILVGDNKHPANYGHLCAKGERLLDSLAQPNVLRYPKLRSGMPLDWD KASTLIADTFAKTIAEHGPDSVALYLSGQLLTEDYYVANKFAKGFLKTANVDTNSRLCMSSAVSAMQRAFGEDVVPGCYD DLEQADVIVLVGANTAWTHPVLFQRILAAIKANNAQLVVIDPLSTATAKQADLHLAIKPGADLTLFHGLLGYLADQNRVD HAYIAAHTEGFDTVVLQAQQLSANLADLATQVGVSVTQLTQFYQLVANNKKVLTASCQGVNQSTIGTDATNAMINCHLAL GHIGQAGCGFFSLTGQPNAMGGREVGGLATQLACHMGFSQPEQQLLADFWKVDSIADQKGLVAVEMFDALAEGKIKAIWI MGTNPVVSLPNSEKIAQALADCPFVVVSEISPDSDTAKLADVLLPAQGWSEKCGTVTNSERTITRQRGFITAKGQAKPDW WAVSQVAKKMGFDGFEFDDNASIFSEFAALSAKVKQVFPTKVFDLTGLTELSKAQYDALAPTQWPIASATQIGQQNVRVF GLGEFATATGKAQFVTPAVVSVPQQSLPSNTLLLNTGRSRDQWHTMTRTGHIASLRASIPEPVVHLHSSQLSALSLTEGG LVRIEAIQNQIEQYSTETANPDLFTHASFTMARAVVDDDIPTNMALMSMHWSAQFSLTKGVNQALDARVDPISKQPGFKC QPVTLTPVELALQGVVFGQHYSSAHGLCWQVAQTLENGVCHHIGFTDTDDGFAYQATVHSLKWTLTVVGQPLYIQCNMDK GLLKALKVLSHTQVNVALYQMNDFIGKPVDKQLIKQLHQQIKAGNSPLICACTGVTEANINDEINQQFNDQVMSDGLANI SFEQALDSTQLLLGCGRQCGSCHSEVKQCAKQSWKDALSYCESYSDIDHQPSVAEDVA
Sequences:
NA
Specific function: NA
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA