Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114562571

GI number:

Start: 1661995

End: 1666221

Strand: Direct

Name: Not Available

Synonym: Sfri_1394

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562570

Following gene: 114562572

Centisome position: NA

GC content: NA

Gene sequence:

>4227_bases
ATGACTTTGCGTACTTCATATATTGTGGGTTTGATTGCCTGCACAGCCGTTGGCTTAACCAGTGTACAAATTATTGAGTC
TGCGCATGCAGAAACGCTCAAAATTACTGGCCCCAATGGTGAGGTTAAACAACAAGCGAAACGCCAATATGGTCCAACAA
CATCAAGAGATACGTTTTGGAGTATTGCGCAAAAAGTCAGACCCAGCGATAAGGTCAGTGTTTACCAAGTGATGGCAGCG
TTGTTTGACGCTAATCCACATGCTTTTAGTGGTAATAATTACAATACATTAGAGCGAGGGATGATATTACTTGTTCCTTC
TGTTGATGTAATAGCCGCTATTCCCAATGATGTCGCTAAACGCCGTGCAGAACAAGATGACCGCCGTGCTAGCAGACAAA
CACAGCCTCGTCCCGTCATTAATAATAAACCTATTCAATCTCCTATAGTCGAAACGCCTAAAAAGCCTACCGTTTCAAAA
CCACTGCAAATAGTGCAGCAAACACCTGCTGTAGAAGTACAAACCAAAGCGATTACAGAGGCCAATGCCGTTGTCGTAAA
TGACCTCAATAGCACCTTAGATAAAGCCAATGCAAAAACCTTGATGCTGACCGATGAGCTTGCGCGTGCACAAGATGAAT
TAATGGTCAGCAACAATGACAATCAAGTGTTGAAAAACAAAATTGAACAAATGTCATTAAACATTTCCTCGCTTGAAGAA
GATCTACAACTATTACGCGAGAAATATGAAGGCTTAAGTTTAGAAAATAAAAAACTTGTAGATCAAACTGAAAATGTGGA
ACCCGTTGTAGAAGAACCCACTGACTTTTGGCGCAGCCTAATGGATAACACCATTTTGTTGATCATTGCTGCATCGATTC
CTCTGTTAATTATATTCGGACTTATTTTCTGGTTACTTAGTCGCCGTAATAAAAAAAATCAGCAGTCTGAAGTAAAAACA
GCAACCCAGTCTGAACAAGAGTCTGCAGCTGCAACAGACCGCGATGACTTAGATGACTCTGATGATATTGTGGTCCATTT
AGATTCAAACGATGAAGAGTCAATTGATGATTTATTGGATTTAGACAGCGTAGATTTACAGCCTGAAATCCAAATGGAAG
GTGATGCCGAAATGGATATGGCATCAGATATGTTTGTTAGTGAAACAGAAACAGAAATAGAAGATGAGGAAGGGACCTCA
TTAGATGATTTATGGGCAGAGGCGATGGAAGATCAAGATTCTGATCTTGAACCTCTTGAAGATGACGATGATCTCGACAG
TCTACTGGCTGGATTAGATGACAAGCCAGCTGCAACCCTAAATTCTGCTGCACCAGAAGATGATTTAGACAGTTTGTTGG
CGGGTTTAGATGAAGATACAGAAAAAGATGATCTAGATGCTTCAGCAGAAAATGATATTGACTCGCTATTAGCTGAGTTT
GATATGCCAGCAGAGCCGGATAATGTTGCCGCTGAAGAATCGGTAAAATCAGCTGAAACAAGCGCGGATGATGATATCGA
CTCACTATTGGCTGAATTTGACATGCCAGCTGAATCGGACGATGTTGCCGCCGAAGAACCGGTGAAATCAGCTGAAACAA
GTGCGGAAGATGATATTGATGCATTGTTGGCTGAGTTTGATATGCCAGCAGAGCCGGATGATGTTGTCGCTGAAGAATCG
GTAAAATCAGCTGAAACAAGCGCGGATGATGATATCGATGCATTGTTGGCTGAGTTTGATATGCCAGCAGAGCCAGATGT
TGCCACTGAAGAACCGGTAAAGTCAACTGAAACAAAGGCCGATGATGATATCGATGCACTGTTAGCTGAGTTTGATATGC
CAGCAGAGCCAGATGTTGCTGCCGTTGAAGAACCGCAAATATCAGCTGAAACAAAGGCAGATGATGATATCGATGCATTG
TTGGCTGAGTTTGATATGCCAGCAGAGCCGGATGATGTTGCCGTTGAAGAACCGCAAATATCAGCTGAAACAAAGGCAGA
TGATGATATCGATGCATTGTTGGCTGAGTTTGATATGCCAGTAGAGCCGGATGATGTTGCCGTTGAAGAACCGCAAACAT
CAGCTGAAACAAAGGCAGATGATGATATCGATGCATTGTTGGCTGAGTTTGATATGCCAGCAGAGCCAGATGTTGCTGCC
GTTGAAGAACCGCAAACACCAGCTGAAACAAAGGCAGATGATGATATTGATGCATTGTTGGCTGAGTTTGATATGCCAGT
AGAGCCGGATGATGTTGCCGGTGAAGAACCGCAAATATCAGCTGAAACAAAGGCAGATGACGATATCGATGCATTGTTGG
CTGAGTTTGATATGCCAGCAGAGCCAGATGTTGCCTGTGAAGAACCGCAAATATCAGCTGAAACAAAGGCAGATGACGAT
ATCGATGCATTGTTGGCTGAGTTTGATATGCCAGCAGAGTCGGACGATGTTGCCGCTGAAGAGCCGATAAAATCAGCTGA
AACAAACGCGGAAGATGATCTTGATTCATTACTATCAAAATCTGATTCAGAACAAACTGATGTTGATGCTCCTACTGCAG
CGGACGAAGATATAGATGAACTCCTAGCTGGCTTGTCTGTGACCAAGGATGAGAACGAACAAGATAGTTCAGAAGATGAT
GGGGATACTGAACCTCAGCCACTAAACAGTGATTCAGTTGATAACGATGATGATATTGCCGCGTTAATTGCAGCTGAGTT
ACAAGATGATGTTAACGAAGATATCCCAGACGTAGAGTCTAGTGACGATGACATTGATGCATTGTTGTCTAGCTTGAATG
AGCCTGTTATTGAATCAGTATTTGACGAAGAAAGTGATGAATTATCTACAGTAGAACAAGCATCTTCCGATAGTGATGAT
TTAGCGGCGCAAATTGCAGCTGAGTTAAGCGATGATGAAGATGTCGCTGACTCTATTGATGATAATGAAACCAGTGACGA
TGACATCGATGCATTATTAGCGAGTCTTAACGAGCCGGTGGTTGAGTCAGATGCTGATGTTCAGGAAAAAGCGGCTGTCC
AAGCACAGATTGCAGCTGAATTAGATGATGATATGTCTAGCGAAGAATCTACATCTGATGATGAGTCACTCGATGATGAT
ATTAATACCTTATTGGCAAGCTTTAAAGACGATATAAAAGACGACGCTCCGTTGATTGGCGAGACTGAAAATATTGACTC
TGACAGCACTCAAATTGACGGCTCTCAATCTGATAATGAAAGTATCGACGATAATGCATTGTTTGATGAGTTTGATGAAT
ATCTTAATGATACCGATTTAGTCAACACAGATGATGTCGCAGATATTGAAACGACCCCGTTTATTGAGCCTGAAACCGAT
GCTGATAAAGCTGCAAACAGCGATGACGAAGATAACAGCTGGTTAGATGCTGAACTTGAAGCCGCGTTAGCATCAACGAG
CAATAATGATGTTGAGTCCGATCAAGAAATTGCAGCTATACCAACTCCTGTAGCCACGCCTACATCAGAAACTGATGCCG
ATGATGGTTTGGATGCATTATTAGCGCAAATGGACGATGATGATAAAACTTCATCTACAGCGCAAAATAAAGCCAATAAA
GATTCAGGTTTCTTTAATGACCTTAAATCAAGCAAACCTAAACCTGAACTTTTAGATTGGGAAAGCGATTTACTTAAAGC
TGCCGAGTCTGCTGCTGACGAGAGAGAAGTCGATGAAGCAGATGTGAGTGATGATGATCTACTGGCGGCATTTTCACAGT
CACTCAAAGATGATGACAACGATGATGACTTTACCTCTGAAGATGAGTATATCCTTAGCGATGACAACTTAACGGTTGAT
GAAGCATTAGCAGCACTCGATCAAAAAGAACGAAGCCAATCAACAGAATATAAAGCCAGTGACGATGACTTAATGCGTTT
TGAGCGTGAAAACGGTTATATCGACATTGATAAACTGTTGAACGATGCTGATGAAGATGACGATAAAACCGACCAGTATA
AAGACGTCAATGTTGATATGGGCTCTGTTAATTCGTTAATCGGCAACCCGAACATGATCGATGTTGATGATGAAGAAAAC
TCCGTTAATGCAAAACTTGATTTAGCCAGGGCGTATATTGAAATTGAAGACCAAGACAGTGCCCGAGCGTTATTAAAAGA
AGTGCAAATGGACGGTAATGAACGTCAACAATTAGAAGCAAAAAATTTACTGAAAAGTGTTAATTAA

Upstream 100 bases:

>100_bases
TGTGACTAGATACAGTTAACGACCATAATATTAACGATAAAAATTGCCTAAAGCCTGTTGCCAAGCCGGTAACTCAATAG
CGCTAAAAGGGAAGGATGGG

Downstream 100 bases:

>100_bases
CGCGAGCAATTGAGGCTGAATAGGCAAAAACATAGGCTTATGTTGACCACATAAAAGCAAACGGCGCAGATACATGCGCC
GTTTTTTTGTGATAAACTGC

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1408_residues
MTLRTSYIVGLIACTAVGLTSVQIIESAHAETLKITGPNGEVKQQAKRQYGPTTSRDTFWSIAQKVRPSDKVSVYQVMAA
LFDANPHAFSGNNYNTLERGMILLVPSVDVIAAIPNDVAKRRAEQDDRRASRQTQPRPVINNKPIQSPIVETPKKPTVSK
PLQIVQQTPAVEVQTKAITEANAVVVNDLNSTLDKANAKTLMLTDELARAQDELMVSNNDNQVLKNKIEQMSLNISSLEE
DLQLLREKYEGLSLENKKLVDQTENVEPVVEEPTDFWRSLMDNTILLIIAASIPLLIIFGLIFWLLSRRNKKNQQSEVKT
ATQSEQESAAATDRDDLDDSDDIVVHLDSNDEESIDDLLDLDSVDLQPEIQMEGDAEMDMASDMFVSETETEIEDEEGTS
LDDLWAEAMEDQDSDLEPLEDDDDLDSLLAGLDDKPAATLNSAAPEDDLDSLLAGLDEDTEKDDLDASAENDIDSLLAEF
DMPAEPDNVAAEESVKSAETSADDDIDSLLAEFDMPAESDDVAAEEPVKSAETSAEDDIDALLAEFDMPAEPDDVVAEES
VKSAETSADDDIDALLAEFDMPAEPDVATEEPVKSTETKADDDIDALLAEFDMPAEPDVAAVEEPQISAETKADDDIDAL
LAEFDMPAEPDDVAVEEPQISAETKADDDIDALLAEFDMPVEPDDVAVEEPQTSAETKADDDIDALLAEFDMPAEPDVAA
VEEPQTPAETKADDDIDALLAEFDMPVEPDDVAGEEPQISAETKADDDIDALLAEFDMPAEPDVACEEPQISAETKADDD
IDALLAEFDMPAESDDVAAEEPIKSAETNAEDDLDSLLSKSDSEQTDVDAPTAADEDIDELLAGLSVTKDENEQDSSEDD
GDTEPQPLNSDSVDNDDDIAALIAAELQDDVNEDIPDVESSDDDIDALLSSLNEPVIESVFDEESDELSTVEQASSDSDD
LAAQIAAELSDDEDVADSIDDNETSDDDIDALLASLNEPVVESDADVQEKAAVQAQIAAELDDDMSSEESTSDDESLDDD
INTLLASFKDDIKDDAPLIGETENIDSDSTQIDGSQSDNESIDDNALFDEFDEYLNDTDLVNTDDVADIETTPFIEPETD
ADKAANSDDEDNSWLDAELEAALASTSNNDVESDQEIAAIPTPVATPTSETDADDGLDALLAQMDDDDKTSSTAQNKANK
DSGFFNDLKSSKPKPELLDWESDLLKAAESAADEREVDEADVSDDDLLAAFSQSLKDDDNDDDFTSEDEYILSDDNLTVD
EALAALDQKERSQSTEYKASDDDLMRFERENGYIDIDKLLNDADEDDDKTDQYKDVNVDMGSVNSLIGNPNMIDVDDEEN
SVNAKLDLARAYIEIEDQDSARALLKEVQMDGNERQQLEAKNLLKSVN

Sequences:
NA

Specific function: NA

COG id: COG3170

COG function: function code NU; Tfp pilus assembly protein FimV

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA