Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114562478

GI number:

Start: 1542734

End: 1545946

Strand: Direct

Name: Not Available

Synonym: Sfri_1300

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562477

Following gene: 114562479

Centisome position: NA

GC content: NA

Gene sequence:

>3213_bases
ATGTCGGCGAAACTGTTTAATCTCCCCATTAAGCTTTCATTAGAGATGATTGCGAAACTGTTTTCGGCCACCCAAATTCA
AAAAGCGCAAAACTATTTGATCCAAGGTCGAGTTCTAGAAGTTACTGCCAGCAGTAATAATCATGATATTGAGGCCTATG
TAGAAGGCTCTGCTGCTGAACCCTATCGTCAAGAAATCACTCTGGTTAATGTTAATCACAAAATTGTGATGCGTTCACAT
TGTACTTGCCCTGTTAGAACAAACTGCAAACACGTAGCTGCTGCGATGCTGGCACTGGTCGATAAAAAACCGGTTGAAGA
GCAACGTATCCACCAATGGTTACGCCAACTTGACGAGCAAAAAACGGTTGCCGAATTTGAGGAAGAGGACGAAGAAAAAG
ATCGCATTATTTATGTGTTATCCAATGATCCTCATGGTATTTTTGTCGAATTTAAACGCAGTAAATTAAATAAAAAAGGC
CAATACAATAAAGGCAGCAAGCTGGCATTAGCCGATATTCGCTATAGTATGCCGTGGTGGATAGACCCTGAAGATAAACA
GATTATCAGCTTGTTACTGTCATCAAATAATCATGGCTCTAAAATTTATATTGAAGGTGAGATTTCATTTTTAGCACTGA
CTAAAATGCTCACAGCCGAAGTGTGTTTTTGGGAAGAAAACCGTATTCCCCTGACATGGGCTAAATCTGTTGTACCTGAA
TTTGTCTGGTGTGAAATTGATAAAAAACATACCCAAATGCAAATGCGCATGCCTGGGCTGGATAATTGGGAGTTTATTGC
TACCGAGCCACCTTTGTATGTTGAATTAGACTATTTGCATCTAGGTAGAATAGAAACTGATTTACCAGTTAAAAAGTTAA
GTTTATTGCAACACATGCCGCCAGTGCCCTTGGCTCAAGTAGATGCCATTAGTCATAAAATGCTCCAGCATTTTTCACCT
AAAACGGTGCCTGTTCCTAGTGAAATTGATTTTTGCGAGATAACAGACTCACTGTTAACACGCTTAACCTTTACGCGTGA
GCTCATTGCCAACAACCCGATTCTGCAACCGGTTATTCGTGTTGATCATTGTTACGGTGAAATTACCTTTAATGCATCGA
CTAAACCCGAACGCATAAGCTTAGTCAAAAAAAATCAAGTTCAATATCAAGTGCATAGACATGTCGAGCAAGAACTCGCG
GCATTACAGTCATTAGCGGATATAGGCTTAGTGACGCTTGAGCCAGACGCTACGCTGGCCAGTTCACAACAACCCTATTA
TGTCAGTGTCGGGTTATTACCCGAGTCGATTTTTGAATGGTCTGAATTGACCGAAAATGGTCTTGATGCATTAACTGCCC
TGGGGATGGAGATTCATTTTGATGATGACTTCGACTTACAAATTACCGATGCACAGTTAGATGTCGACTTAGTTGACGAT
GATGAGTCTGGCTGGTTTTCATTATCGCTCAGTGCCGACATCGATGGCCAAAGTGTACCGTTATTAGCCTTAGTTGCCCG
TTGGTTGCAGCAAAATGGTGAGCCGGCAGACGATGATGAATTGTTATTACCTGGCCCTAACGGTGGTTTTATTAAAATAA
AAGCCAAAACCATTAAGCCGCTGATTAGTATTATCCAAGAATTATTTAATCGTCATTCTGGTGATGTCATTTCGATACCA
CGCAACCGTGCGCATATTTTGAATGATTTATCTGCCAGTGACGTGCGTTTGCTTAATGGCGAACGTGTGCGCAATTTAGC
CGCCAAACTCGCAGAGTTTAAAGGGGTGGTTCCGGTTGAGTTACCTGATGGCCTAAATGCGACATTACGTGATTATCAAA
AACAAGGTTTTGACTGGTTGTGTTTTCTTAAGGAATATCAACTAGGTGGTATTTTAGCCGATGACATGGGCTTAGGTAAA
ACCGTACAAGCGTTGGCATTTTTACTCAAAGCCAAGCAAGACGCTACCGAGCGTCGCACCAGTTTAATTGTTTGCCCCAC
TAGCTTAGTGGGGAACTGGTTAAAAGAAGCCAATAAGTTTGCTCCGTCGCTGAATGTGGTGGTGATCCACGGCAATAAAC
GCCAACCTTTATTAGATCAAATTAATCAGTTTGATGTGGTCGTGACAACCTATCCATTAATGTTACGTGATGAAGCCATT
TATTGTGAATATGTGTTTGAGCATATTATTTTGGATGAAGCACAACAAATTAAGAATGCCCAAGCAAAAGTCACCCAAGT
GATTAAAACTCTAAGAGGTCGATTCCGCTTATGTTTATCGGGTACGCCGCTTGAAAACCATTTAGGCGAATTAAAATCAT
TGATGGATTTTTGTTTGCCAGGTTTATTAGGTCAGCATACCTACTTTAATAAGCAGTTCCGTGGTCCGATTGAGAAGCAG
GCCGATGTTGAAAAGTCGCAGTTACTGAGTCAGCGTATTGCTCCCTTTATGCTGCGCCGCACTAAAAAAGAAGTGGTGTC
TGAATTACCTGAAAAAACCGTGATTATTCAAACTCTGGAACTTGAAAGAGATCAACGTAATTTGTATGAGTCTATCCGTT
TAGTGATGGAGAAAAAATTGCGTGAACTGTTTGCCAAGAAAGGGGTGTCGAGCAGTCATATTGAGTTTTTAGATGCATTG
TTGAAATTACGTCAAGCCTGTTGCGACCCACGTTTAGTGAAGCTTGAACAAGCTCAACAAGTTAAAGACAACGCAAAAAT
GACCTGGTTAATCCAAAACCTGCCTGAAATGATTGAAGAAGGTCGTAAAATCCTTATCTTCAGCCAATTTACTGGCATGT
TAGCGTTGATTGAAGACGAACTAAAACGCTTAACAATTAGCTACAGTAAATTAACGGGACAAACTCGCGACCGTCAAACC
CAGATTGATGCTTTTCAAGAGGGGGATAACTCGGTGTTTTTGATCAGTTTAAAAGCGGGTGGAACCGGGCTTAACCTCAC
TGCCGCAGACACGGTTATTCATTTTGACCCGTGGTGGAACCCTGCAGCGGAGCGCCAAGCGACCGATCGTGCTCATCGTA
TTGGCCAGTTAAACCCGGTGTTTGTTTATAAACTGATTGCCCAGGGCACCGTTGAAGAGAAGATTCAAGAAATGCAGCAG
CACAAACAAGGTTTGGCTGACAGTATTTTATCTGATGGGACTCAAGGTCCATGGCAGGGCAGTGCGAACGATTTATTAGC
ATTGTTGAGTTAA

Upstream 100 bases:

>100_bases
GCAAAGCCTAGATATTGCCTGCTTTCTTCCATAGAATGGCAAGTTAACTTTTTTATCAGCAGCCATTGTTTATTTTGCTG
CGGTTTTATTAGGTGTATTG

Downstream 100 bases:

>100_bases
TCGTTGCGTTAATAGTTGAGTTAATGACACGGAAATCACTTGAACTAGCGTGTAGATTCGCGAAGCTCAAGTGATTTAGC
GGTTATCAATTACCCTAGAT

Product: SNF2-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1070_residues
MSAKLFNLPIKLSLEMIAKLFSATQIQKAQNYLIQGRVLEVTASSNNHDIEAYVEGSAAEPYRQEITLVNVNHKIVMRSH
CTCPVRTNCKHVAAAMLALVDKKPVEEQRIHQWLRQLDEQKTVAEFEEEDEEKDRIIYVLSNDPHGIFVEFKRSKLNKKG
QYNKGSKLALADIRYSMPWWIDPEDKQIISLLLSSNNHGSKIYIEGEISFLALTKMLTAEVCFWEENRIPLTWAKSVVPE
FVWCEIDKKHTQMQMRMPGLDNWEFIATEPPLYVELDYLHLGRIETDLPVKKLSLLQHMPPVPLAQVDAISHKMLQHFSP
KTVPVPSEIDFCEITDSLLTRLTFTRELIANNPILQPVIRVDHCYGEITFNASTKPERISLVKKNQVQYQVHRHVEQELA
ALQSLADIGLVTLEPDATLASSQQPYYVSVGLLPESIFEWSELTENGLDALTALGMEIHFDDDFDLQITDAQLDVDLVDD
DESGWFSLSLSADIDGQSVPLLALVARWLQQNGEPADDDELLLPGPNGGFIKIKAKTIKPLISIIQELFNRHSGDVISIP
RNRAHILNDLSASDVRLLNGERVRNLAAKLAEFKGVVPVELPDGLNATLRDYQKQGFDWLCFLKEYQLGGILADDMGLGK
TVQALAFLLKAKQDATERRTSLIVCPTSLVGNWLKEANKFAPSLNVVVIHGNKRQPLLDQINQFDVVVTTYPLMLRDEAI
YCEYVFEHIILDEAQQIKNAQAKVTQVIKTLRGRFRLCLSGTPLENHLGELKSLMDFCLPGLLGQHTYFNKQFRGPIEKQ
ADVEKSQLLSQRIAPFMLRRTKKEVVSELPEKTVIIQTLELERDQRNLYESIRLVMEKKLRELFAKKGVSSSHIEFLDAL
LKLRQACCDPRLVKLEQAQQVKDNAKMTWLIQNLPEMIEEGRKILIFSQFTGMLALIEDELKRLTISYSKLTGQTRDRQT
QIDAFQEGDNSVFLISLKAGGTGLNLTAADTVIHFDPWWNPAAERQATDRAHRIGQLNPVFVYKLIAQGTVEEKIQEMQQ
HKQGLADSILSDGTQGPWQGSANDLLALLS

Sequences:
NA

Specific function: NA

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA