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The map label for this gene is yraN [C]

Identifier: 114331647

GI number: 114331647

Start: 1747620

End: 1747970

Strand: Direct

Name: yraN [C]

Synonym: Neut_1662

Alternate gene names: 114331647

Gene position: 1747620-1747970 (Clockwise)

Preceding gene: 114331646

Following gene: 114331649

Centisome position: 65.67

GC content: 47.01

Gene sequence:

>351_bases
ATGTCATCCACGAAAAACAAAGGCAGTGATGCCGAACAACAGGCCACTATTTTTCTCCAACAACAGCAATTAACTCTGCT
GGAAAAAAATTATCGCTGCCGGTTTGGTGAAATTGATCTCATCATGCAGGATGGCGACACGGTAGTATTTGTTGAGGTCA
GAATGCGCGTTAATCAACTCTTTGGTGGTGCAGCTGCCAGCATCACGCCTGCCAAGCAGCTCAAGCTGACACGCGCCGCT
CGGCATTATCTGGCAAGGTGTGATGAAGATTTTCCCTGCCGTTTTGATGCGATTCTGATTTCCGGTAACCGGGAAATTGA
ATGGATACAAAATGCATTTGACGAAGGCTGA

Upstream 100 bases:

>100_bases
AGTAAAAAATTGCCTTTGCGAATGCCAATGGACCTTTAGCCGCAAGTGTAGCGTACTGAAGCAACCCGGAATAATTTTCC
AATAAGTTACAGGTACTCCT

Downstream 100 bases:

>100_bases
TGACGGGCTGCCTAATCAATGCAGCGCCATTAAACATAGGTAGTTGCTGGTTATACAGACTGACATAACGTATCAAGGTC
TGTTCCAGATCTTCAGTACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSSTKNKGSDAEQQATIFLQQQQLTLLEKNYRCRFGEIDLIMQDGDTVVFVEVRMRVNQLFGGAAASITPAKQLKLTRAA
RHYLARCDEDFPCRFDAILISGNREIEWIQNAFDEG

Sequences:

>Translated_116_residues
MSSTKNKGSDAEQQATIFLQQQQLTLLEKNYRCRFGEIDLIMQDGDTVVFVEVRMRVNQLFGGAAASITPAKQLKLTRAA
RHYLARCDEDFPCRFDAILISGNREIEWIQNAFDEG
>Mature_115_residues
SSTKNKGSDAEQQATIFLQQQQLTLLEKNYRCRFGEIDLIMQDGDTVVFVEVRMRVNQLFGGAAASITPAKQLKLTRAAR
HYLARCDEDFPCRFDAILISGNREIEWIQNAFDEG

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=116, Percent_Identity=47.4137931034483, Blast_Score=103, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1662_NITEC (Q0AFH8)

Other databases:

- EMBL:   CP000450
- RefSeq:   YP_747869.1
- ProteinModelPortal:   Q0AFH8
- STRING:   Q0AFH8
- GeneID:   4273815
- GenomeReviews:   CP000450_GR
- KEGG:   net:Neut_1662
- NMPDR:   fig|335283.3.peg.2197
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   EVRQRKN
- PhylomeDB:   Q0AFH8
- ProtClustDB:   PRK12497
- BioCyc:   NEUT335283:NEUT_1662-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13203; Mature: 13072

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTKNKGSDAEQQATIFLQQQQLTLLEKNYRCRFGEIDLIMQDGDTVVFVEVRMRVNQL
CCCCCCCCCCCCHHEEEEEEHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEEHHHHHHH
FGGAAASITPAKQLKLTRAARHYLARCDEDFPCRFDAILISGNREIEWIQNAFDEG
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHCCCC
>Mature Secondary Structure 
SSTKNKGSDAEQQATIFLQQQQLTLLEKNYRCRFGEIDLIMQDGDTVVFVEVRMRVNQL
CCCCCCCCCCCHHEEEEEEHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEEHHHHHHH
FGGAAASITPAKQLKLTRAARHYLARCDEDFPCRFDAILISGNREIEWIQNAFDEG
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA