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The map label for this gene is rsmI [H]

Identifier: 114331645

GI number: 114331645

Start: 1744686

End: 1745582

Strand: Reverse

Name: rsmI [H]

Synonym: Neut_1660

Alternate gene names: 114331645

Gene position: 1745582-1744686 (Counterclockwise)

Preceding gene: 114331648

Following gene: 114331644

Centisome position: 65.6

GC content: 51.06

Gene sequence:

>897_bases
ATGCCAACTGCAGCAGGAGTATCTAAAGGAACATTATATGTGGTTGGCACACCCATCGGGAACTTGCGTGATATTTCCCT
GCGTGCACTGGAGGTACTATCTGCTGTCGATTGCATTGCAGCCGAGCATGTCCAGAGCGCACAAAAACTGCTGGCAGCAC
ACACTGTACACATCGCTGTGCATAACAACACTACACATACTCGAATCACGCCGTTGCATCAGCATAACGAAGGTAACGCA
GCGCAAAAAATCATTGAGCTGTTGGTATCTGGTCAATCCGTCGCTCTGATTTCTGATGCAGGCACCCCGGCTATCTCTGA
TCCAGGTGCTTTTCTGGTGCAACAGGTGCGTGCGCGAAATTTTCCGGTAGTGCCGATTCCCGGTGCCAATGCGGCGCTGT
GCGCCTTGTCTGCTTCCGGGTTGATTGCCCCGCACTTCTTCTTTTATGGATTTTTACCAGCTAAAAGTGGTGAGCGTCAG
CGCAAATTGACGTCTCTCAAGACATTGTATGCTTGCATTCCGGTTTTTTATGAAGCACCACACCGCGTACTCGAATGTGT
TGCAGATATGGTTGCCGTATTCGGCCCAACCCGTGAAATCACATTTGCCCGTGAACTTACCAAGATTTTCGAGACGATTC
ACACCTGCATACTGGGCGAAGCCCTGGATTGGCTGCGAGCAGATGAAAATCGGCTGCGAGGTGAATTCGTTTTGCTGCTG
GCGCCAGAGGAAGAGCCAGATCAGGAAGATATCAGCCTGCAAGCCGTGCATACACTGGCCATTCTGCAAAGAGATCTGCC
TCTGAAACAGGCCGTGCAACTGGCTGCAGAAATTACCGGAGAGAGCAGGAAAAAACTGTATACCCGGGCGCTGCTGGAAC
AAAAGACAGGGATGTGA

Upstream 100 bases:

>100_bases
TGGAAGCTGGCTGACTGTAAATGGAAAAAGCAGAGGAACTGCCGTATAGTGCGATTATGCCCGTGGAAAATCATAGGAAC
AGACGTTTTATAACCAGAAT

Downstream 100 bases:

>100_bases
CAAATCCAGCCAGATTTGGAAATTTTTACTGCTGTGGAGTTCTGGAGGAGAATTTGTGTTTGTTTATTGATTTGTGAGGA
AAACCGGATTGAACGATATG

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MPTAAGVSKGTLYVVGTPIGNLRDISLRALEVLSAVDCIAAEHVQSAQKLLAAHTVHIAVHNNTTHTRITPLHQHNEGNA
AQKIIELLVSGQSVALISDAGTPAISDPGAFLVQQVRARNFPVVPIPGANAALCALSASGLIAPHFFFYGFLPAKSGERQ
RKLTSLKTLYACIPVFYEAPHRVLECVADMVAVFGPTREITFARELTKIFETIHTCILGEALDWLRADENRLRGEFVLLL
APEEEPDQEDISLQAVHTLAILQRDLPLKQAVQLAAEITGESRKKLYTRALLEQKTGM

Sequences:

>Translated_298_residues
MPTAAGVSKGTLYVVGTPIGNLRDISLRALEVLSAVDCIAAEHVQSAQKLLAAHTVHIAVHNNTTHTRITPLHQHNEGNA
AQKIIELLVSGQSVALISDAGTPAISDPGAFLVQQVRARNFPVVPIPGANAALCALSASGLIAPHFFFYGFLPAKSGERQ
RKLTSLKTLYACIPVFYEAPHRVLECVADMVAVFGPTREITFARELTKIFETIHTCILGEALDWLRADENRLRGEFVLLL
APEEEPDQEDISLQAVHTLAILQRDLPLKQAVQLAAEITGESRKKLYTRALLEQKTGM
>Mature_297_residues
PTAAGVSKGTLYVVGTPIGNLRDISLRALEVLSAVDCIAAEHVQSAQKLLAAHTVHIAVHNNTTHTRITPLHQHNEGNAA
QKIIELLVSGQSVALISDAGTPAISDPGAFLVQQVRARNFPVVPIPGANAALCALSASGLIAPHFFFYGFLPAKSGERQR
KLTSLKTLYACIPVFYEAPHRVLECVADMVAVFGPTREITFARELTKIFETIHTCILGEALDWLRADENRLRGEFVLLLA
PEEEPDQEDISLQAVHTLAILQRDLPLKQAVQLAAEITGESRKKLYTRALLEQKTGM

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=291, Percent_Identity=46.7353951890034, Blast_Score=228, Evalue=4e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32390; Mature: 32259

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTAAGVSKGTLYVVGTPIGNLRDISLRALEVLSAVDCIAAEHVQSAQKLLAAHTVHIAV
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
HNNTTHTRITPLHQHNEGNAAQKIIELLVSGQSVALISDAGTPAISDPGAFLVQQVRARN
ECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCC
FPVVPIPGANAALCALSASGLIAPHFFFYGFLPAKSGERQRKLTSLKTLYACIPVFYEAP
CCEEECCCCCHHEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HRVLECVADMVAVFGPTREITFARELTKIFETIHTCILGEALDWLRADENRLRGEFVLLL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
APEEEPDQEDISLQAVHTLAILQRDLPLKQAVQLAAEITGESRKKLYTRALLEQKTGM
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PTAAGVSKGTLYVVGTPIGNLRDISLRALEVLSAVDCIAAEHVQSAQKLLAAHTVHIAV
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
HNNTTHTRITPLHQHNEGNAAQKIIELLVSGQSVALISDAGTPAISDPGAFLVQQVRARN
ECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCC
FPVVPIPGANAALCALSASGLIAPHFFFYGFLPAKSGERQRKLTSLKTLYACIPVFYEAP
CCEEECCCCCHHEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HRVLECVADMVAVFGPTREITFARELTKIFETIHTCILGEALDWLRADENRLRGEFVLLL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
APEEEPDQEDISLQAVHTLAILQRDLPLKQAVQLAAEITGESRKKLYTRALLEQKTGM
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]