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The map label for this gene is pchC [H]

Identifier: 114331643

GI number: 114331643

Start: 1742931

End: 1743287

Strand: Reverse

Name: pchC [H]

Synonym: Neut_1658

Alternate gene names: 114331643

Gene position: 1743287-1742931 (Counterclockwise)

Preceding gene: 114331644

Following gene: 114331642

Centisome position: 65.51

GC content: 45.66

Gene sequence:

>357_bases
ATGTTCTTTCTAAAAGATGATCTGGTTGTAAAACGAATTTTTACGATCAGCATGACGCTGTCTATGGCCTTGTTTATCTT
GCCAGCTTACGCTGCTGAAGAGGCTGTAGAGAGAGATCTCGGAAATAGTGGTCAGTGGTCAGGCGGTGAAAACGTTTATG
CCAAGGTGTGTGGTTATTGTCATGACACCGGGATTGGCCCTTCTATCAAAGGCCGGCAATTACCGCCCGAGTATATTACC
CATGTCGTGCGGCACGGGTTTCGAGCTATGCCTGCTTTTCCTGAGCCGTATATTAGCAACGAAGATTTGAAATCCCTCGG
GCAATATATTCAACAAACCACTCCTGAAAAAAAGTGA

Upstream 100 bases:

>100_bases
AATTTTGTTTCTGCAACTAGACGATTTGCCAGATTATATGCAGGAACTATATTTTTCCTGCGGATTACTTTTTCCGTCAG
CAATAAACGGAGGTGTTGAA

Downstream 100 bases:

>100_bases
GGGTAATTCCATGGATATCCAGCGTCGCCTACTACTCAAGGGTATCGTTCTGAGCGGTGTTTCAGGTTGTCTTGGATGGG
CAAATCCAAGCGTTGCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Flavocytochrome c; P-cresol methylhydroxylase cytochrome subunit [H]

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MFFLKDDLVVKRIFTISMTLSMALFILPAYAAEEAVERDLGNSGQWSGGENVYAKVCGYCHDTGIGPSIKGRQLPPEYIT
HVVRHGFRAMPAFPEPYISNEDLKSLGQYIQQTTPEKK

Sequences:

>Translated_118_residues
MFFLKDDLVVKRIFTISMTLSMALFILPAYAAEEAVERDLGNSGQWSGGENVYAKVCGYCHDTGIGPSIKGRQLPPEYIT
HVVRHGFRAMPAFPEPYISNEDLKSLGQYIQQTTPEKK
>Mature_118_residues
MFFLKDDLVVKRIFTISMTLSMALFILPAYAAEEAVERDLGNSGQWSGGENVYAKVCGYCHDTGIGPSIKGRQLPPEYIT
HVVRHGFRAMPAFPEPYISNEDLKSLGQYIQQTTPEKK

Specific function: This is the heme-containing component of the p-cresol methylhydroxylase. It accepts electrons from the flavoprotein subunit [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13228; Mature: 13228

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFLKDDLVVKRIFTISMTLSMALFILPAYAAEEAVERDLGNSGQWSGGENVYAKVCGYC
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
HDTGIGPSIKGRQLPPEYITHVVRHGFRAMPAFPEPYISNEDLKSLGQYIQQTTPEKK
HCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFFLKDDLVVKRIFTISMTLSMALFILPAYAAEEAVERDLGNSGQWSGGENVYAKVCGYC
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
HDTGIGPSIKGRQLPPEYITHVVRHGFRAMPAFPEPYISNEDLKSLGQYIQQTTPEKK
HCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7929007; 10565539; 3790500; 1846290; 10623531 [H]