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The map label for this gene is cc4 [H]

Identifier: 114331637

GI number: 114331637

Start: 1735457

End: 1735783

Strand: Reverse

Name: cc4 [H]

Synonym: Neut_1652

Alternate gene names: 114331637

Gene position: 1735783-1735457 (Counterclockwise)

Preceding gene: 114331638

Following gene: 114331636

Centisome position: 65.23

GC content: 48.62

Gene sequence:

>327_bases
GTGAAAAAGGCAGCTGCCGTTAAACTACTTATCGCTTCTGGCATGATTCTGTCGTTTTCCGGCGTGGCAGATGCAGCTGG
AAACACTGATTCAGTTAAGAGCAAGATCGCCATGTGCCAGGGCTGCCATGGTATTGAAGGATATCGCACCGCATATCCGT
TTGTTTATCATGTACCGAAACTGGGCGGACAACACCTGCCTTACCTGGTTAAGGCGCTGAAAGATTACAGATCTGGAGAG
CGTAACCACCCGACAATGGTTGGTATTGCAGGAACTCTTTCCGATGAGGATATTGATGCCTTGGCTGCTTATTACGCTGG
CAATTGA

Upstream 100 bases:

>100_bases
AAATAATTTCCCTATACACAACAGGGACATAGCTACAACCTTCATTGACTAAACAACACCCATCGTTTAAAGTTCGCTTT
TTTGAGAGGAGGATGCAAAA

Downstream 100 bases:

>100_bases
TCATTCTTCTTAATCCAAGGGATATAAATAACATGAAAAGCTATTTGGTGGCCGCTGTTAGCGGAGTAATATTTCTTCTG
TCGGGGCAGCTGATCGCAGC

Product: cytochrome c, class IC:cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKKAAAVKLLIASGMILSFSGVADAAGNTDSVKSKIAMCQGCHGIEGYRTAYPFVYHVPKLGGQHLPYLVKALKDYRSGE
RNHPTMVGIAGTLSDEDIDALAAYYAGN

Sequences:

>Translated_108_residues
MKKAAAVKLLIASGMILSFSGVADAAGNTDSVKSKIAMCQGCHGIEGYRTAYPFVYHVPKLGGQHLPYLVKALKDYRSGE
RNHPTMVGIAGTLSDEDIDALAAYYAGN
>Mature_108_residues
MKKAAAVKLLIASGMILSFSGVADAAGNTDSVKSKIAMCQGCHGIEGYRTAYPFVYHVPKLGGQHLPYLVKALKDYRSGE
RNHPTMVGIAGTLSDEDIDALAAYYAGN

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11449; Mature: 11449

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAAAVKLLIASGMILSFSGVADAAGNTDSVKSKIAMCQGCHGIEGYRTAYPFVYHVPK
CCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCC
LGGQHLPYLVKALKDYRSGERNHPTMVGIAGTLSDEDIDALAAYYAGN
CCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKKAAAVKLLIASGMILSFSGVADAAGNTDSVKSKIAMCQGCHGIEGYRTAYPFVYHVPK
CCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCC
LGGQHLPYLVKALKDYRSGERNHPTMVGIAGTLSDEDIDALAAYYAGN
CCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]