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The map label for this gene is rimP [H]

Identifier: 114331634

GI number: 114331634

Start: 1733172

End: 1733654

Strand: Reverse

Name: rimP [H]

Synonym: Neut_1648

Alternate gene names: 114331634

Gene position: 1733654-1733172 (Counterclockwise)

Preceding gene: 114331636

Following gene: 114331633

Centisome position: 65.15

GC content: 44.93

Gene sequence:

>483_bases
ATGTGTTTTGAAGGTGGGCTGGTTGGCCCATTTTTTATTTGTGGTGAGGCTATGTCATTGTTTGAGCTGCTCGAACCAAC
GATTGCTGGTATGGGGTATGAGCTTGTTGATATTGAACAATCTGCTCCAGGCAGATTGTTGCGGGTGTTTGTGGATAAAA
AGGATGGGGCGATAACGCTTGCTGATTGCGTTGCTGTCAGCAATCATTTAGGTCAGCTGCTGGCTGTAGAAAATATTGAT
TACAACCGGCTTGAGGTTTCATCACCGGGCTTGGATAGGCCTTTGAAGAAAAGAGCTGATTTTGTCCGTTTTGTGGGGGA
ATCTATCCGGATTAGGTTGCGAATTGCTTTACAAGGGCAAAGAAATTTTGTGGGGACACTGACCGAAGTGGGGGATGATG
CCCTGATGTTGAATGTTGACGGAAAGTTGTTGCAGTTTGAATTGAAAAATCTGGAAAAGGCCCGGCTGATTCCAAAATTG
TAA

Upstream 100 bases:

>100_bases
TTTGATGTGTGCTTTAGATGTAACTCGTGATAACCTATTGGAAACATTGGTGTAAAATAAATTTCTGTTTTTATGGACTG
TAATCCTTGCTATAATACAA

Downstream 100 bases:

>100_bases
TTCGGGTAAATCTGTCGATGGATGTAAGGTTGAAAAATAGGGCTGGAGGAATATGAGCCGCGAGATTTTACTGTTGGTCA
ATGCTTTGGCGCATGAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MCFEGGLVGPFFICGEAMSLFELLEPTIAGMGYELVDIEQSAPGRLLRVFVDKKDGAITLADCVAVSNHLGQLLAVENID
YNRLEVSSPGLDRPLKKRADFVRFVGESIRIRLRIALQGQRNFVGTLTEVGDDALMLNVDGKLLQFELKNLEKARLIPKL

Sequences:

>Translated_160_residues
MCFEGGLVGPFFICGEAMSLFELLEPTIAGMGYELVDIEQSAPGRLLRVFVDKKDGAITLADCVAVSNHLGQLLAVENID
YNRLEVSSPGLDRPLKKRADFVRFVGESIRIRLRIALQGQRNFVGTLTEVGDDALMLNVDGKLLQFELKNLEKARLIPKL
>Mature_160_residues
MCFEGGLVGPFFICGEAMSLFELLEPTIAGMGYELVDIEQSAPGRLLRVFVDKKDGAITLADCVAVSNHLGQLLAVENID
YNRLEVSSPGLDRPLKKRADFVRFVGESIRIRLRIALQGQRNFVGTLTEVGDDALMLNVDGKLLQFELKNLEKARLIPKL

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=146, Percent_Identity=40.4109589041096, Blast_Score=100, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 17693; Mature: 17693

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCFEGGLVGPFFICGEAMSLFELLEPTIAGMGYELVDIEQSAPGRLLRVFVDKKDGAITL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEECCCCCEEH
ADCVAVSNHLGQLLAVENIDYNRLEVSSPGLDRPLKKRADFVRFVGESIRIRLRIALQGQ
HHHHHHHHHHHHEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEECC
RNFVGTLTEVGDDALMLNVDGKLLQFELKNLEKARLIPKL
CCEEEHHHHCCCCEEEEECCCCEEEHHHHCCHHHHCCCCC
>Mature Secondary Structure
MCFEGGLVGPFFICGEAMSLFELLEPTIAGMGYELVDIEQSAPGRLLRVFVDKKDGAITL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEECCCCCEEH
ADCVAVSNHLGQLLAVENIDYNRLEVSSPGLDRPLKKRADFVRFVGESIRIRLRIALQGQ
HHHHHHHHHHHHEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEECC
RNFVGTLTEVGDDALMLNVDGKLLQFELKNLEKARLIPKL
CCEEEHHHHCCCCEEEEECCCCEEEHHHHCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA