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The map label for this gene is (hspc4-1 [H]

Identifier: 114331583

GI number: 114331583

Start: 1678493

End: 1678930

Strand: Reverse

Name: (hspc4-1 [H]

Synonym: Neut_1596

Alternate gene names: 114331583

Gene position: 1678930-1678493 (Counterclockwise)

Preceding gene: 114331584

Following gene: 114331579

Centisome position: 63.09

GC content: 49.77

Gene sequence:

>438_bases
ATGGCAATTACGCGTTATGAACCGTGGGGATTACTATCTCAATTGCAACGAGAACTGGGGCGGGTGCGTGATGATATGGC
GACCGAGGAGGGTGCTTTTGCTGTTGCGGAATGGGCGCCTGCTGTTGATATCAAGGAGGAGGAAGATAAGTTTGTTTTGC
ATGCGGATTTACCTGGCGTAAAGCCTGAAGCAATAGAGATAACTACAGATAACGGCATGCTTACCATCAAAGGCGAGAAA
CAGACTGAAGCCAAGGTAGAGAAGGAAGGATATAAACGGGTGGAGCGGACGCATGGTTCTTTCTTCCGGCGCTTCAGCCT
TCCAGATACGGCTGATCTGGGCGCCATTACAGCGGTAGCTAAAGATGGTGTGCTGGTTGTTACCATTCCCAAACGGGAAG
CTGTTCGACCCAAGAAAATCGCTGTGTCTGCAGAATAA

Upstream 100 bases:

>100_bases
ATGATTGGAGGTATCCAGATGGATGTTTGGGTCGGGATGTCATGCGGATTAAATGACAACCTGTTTTGGTAAATGTTTTT
GACTTGGTATGGAGGTTATT

Downstream 100 bases:

>100_bases
GTCGGATGACAAACGGGGCCCACGGGTCCCGTTTGTCTAATCAGCTGGTTCCAGTTTTTCCCTCAACCCTATGTGCCAAG
ATATTGAATGGATTTCTGTT

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MAITRYEPWGLLSQLQRELGRVRDDMATEEGAFAVAEWAPAVDIKEEEDKFVLHADLPGVKPEAIEITTDNGMLTIKGEK
QTEAKVEKEGYKRVERTHGSFFRRFSLPDTADLGAITAVAKDGVLVVTIPKREAVRPKKIAVSAE

Sequences:

>Translated_145_residues
MAITRYEPWGLLSQLQRELGRVRDDMATEEGAFAVAEWAPAVDIKEEEDKFVLHADLPGVKPEAIEITTDNGMLTIKGEK
QTEAKVEKEGYKRVERTHGSFFRRFSLPDTADLGAITAVAKDGVLVVTIPKREAVRPKKIAVSAE
>Mature_144_residues
AITRYEPWGLLSQLQRELGRVRDDMATEEGAFAVAEWAPAVDIKEEEDKFVLHADLPGVKPEAIEITTDNGMLTIKGEKQ
TEAKVEKEGYKRVERTHGSFFRRFSLPDTADLGAITAVAKDGVLVVTIPKREAVRPKKIAVSAE

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16094; Mature: 15962

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITRYEPWGLLSQLQRELGRVRDDMATEEGAFAVAEWAPAVDIKEEEDKFVLHADLPGV
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCC
KPEAIEITTDNGMLTIKGEKQTEAKVEKEGYKRVERTHGSFFRRFSLPDTADLGAITAVA
CCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEC
KDGVLVVTIPKREAVRPKKIAVSAE
CCCEEEEEECCCCCCCCCEEEEECC
>Mature Secondary Structure 
AITRYEPWGLLSQLQRELGRVRDDMATEEGAFAVAEWAPAVDIKEEEDKFVLHADLPGV
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCC
KPEAIEITTDNGMLTIKGEKQTEAKVEKEGYKRVERTHGSFFRRFSLPDTADLGAITAVA
CCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEC
KDGVLVVTIPKREAVRPKKIAVSAE
CCCEEEEEECCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA