Click here to switch to the map view.

The map label for this gene is 114331463

Identifier: 114331463

GI number: 114331463

Start: 1553024

End: 1553428

Strand: Reverse

Name: 114331463

Synonym: Neut_1474

Alternate gene names: NA

Gene position: 1553428-1553024 (Counterclockwise)

Preceding gene: 114331464

Following gene: 114331462

Centisome position: 58.38

GC content: 51.85

Gene sequence:

>405_bases
GTGGCGTTGGTGCGTGATCGTGCCGAAAACGCTAAACAGAGACCCGTTCCCCCGAACGGGTTTTTTTATGGCCGTTTGAA
AATGAATCAGGATCGCCAGACATCTGCACAGCGTGGTTACGGTTATCGCTGGCAGAAAGCCCGGGAAGGTTACCTGCGTA
AGCATCCTCTATGCGCAGATCATGGGCGGCGTGGCCAGATCGTAGCGGCAACAGTTGTTGATCATGTTATCCCGCATCGG
GGTGATAGCAAGCTGTTCTGGGATTCGGGTAACTGGCAGTCTTTATGTAAGCATTGCCATGACAGCCACAAGCAGAGGCT
AGAGAAGTCCGGAATTGATGCGGGCTGCGATTTATCTGGTATCCCGCTGGATTCCAACCACCACTGGAATCGAAAGAATT
TTTAA

Upstream 100 bases:

>100_bases
CATATAGATCAACTGCTTATAAATATATCGGTGAATTTTTGATGAAATCTCAAAGAAATCGCTTGCACATGGTGCACGAT
TTTGGCATGATCTAGGCAAA

Downstream 100 bases:

>100_bases
ATGATCAGCCCCGGGGGGCGGGTCAAAGTCTACAGCTTTTCGCCTCCTGACCGCACTCCCCTCTCTTTGTGCATTACCGC
GAAATTGGTATGGGGGTATA

Product: HNH endonuclease

Products: NA

Alternate protein names: Prophage LambdaSo Holin; Phage Protein; Restriction Endonuclease; HNH Nuclease Family Protein; Phage Holin Protein; Phage Associated Protein; Prophage; Phage-Like Protein; Phage Endonuclease; Phage Holin; HNH Nuclease

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MALVRDRAENAKQRPVPPNGFFYGRLKMNQDRQTSAQRGYGYRWQKAREGYLRKHPLCADHGRRGQIVAATVVDHVIPHR
GDSKLFWDSGNWQSLCKHCHDSHKQRLEKSGIDAGCDLSGIPLDSNHHWNRKNF

Sequences:

>Translated_134_residues
MALVRDRAENAKQRPVPPNGFFYGRLKMNQDRQTSAQRGYGYRWQKAREGYLRKHPLCADHGRRGQIVAATVVDHVIPHR
GDSKLFWDSGNWQSLCKHCHDSHKQRLEKSGIDAGCDLSGIPLDSNHHWNRKNF
>Mature_133_residues
ALVRDRAENAKQRPVPPNGFFYGRLKMNQDRQTSAQRGYGYRWQKAREGYLRKHPLCADHGRRGQIVAATVVDHVIPHRG
DSKLFWDSGNWQSLCKHCHDSHKQRLEKSGIDAGCDLSGIPLDSNHHWNRKNF

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15488; Mature: 15356

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALVRDRAENAKQRPVPPNGFFYGRLKMNQDRQTSAQRGYGYRWQKAREGYLRKHPLCAD
CCCCCCCHHCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCHHHHHHCHHHCCCCCCC
HGRRGQIVAATVVDHVIPHRGDSKLFWDSGNWQSLCKHCHDSHKQRLEKSGIDAGCDLSG
CCCCCCEEHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
IPLDSNHHWNRKNF
CCCCCCCCCCCCCC
>Mature Secondary Structure 
ALVRDRAENAKQRPVPPNGFFYGRLKMNQDRQTSAQRGYGYRWQKAREGYLRKHPLCAD
CCCCCCHHCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCHHHHHHCHHHCCCCCCC
HGRRGQIVAATVVDHVIPHRGDSKLFWDSGNWQSLCKHCHDSHKQRLEKSGIDAGCDLSG
CCCCCCEEHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
IPLDSNHHWNRKNF
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA