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The map label for this gene is ymfN [H]

Identifier: 114331461

GI number: 114331461

Start: 1550750

End: 1552423

Strand: Reverse

Name: ymfN [H]

Synonym: Neut_1472

Alternate gene names: 114331461

Gene position: 1552423-1550750 (Counterclockwise)

Preceding gene: 114331462

Following gene: 114331460

Centisome position: 58.34

GC content: 54.18

Gene sequence:

>1674_bases
GTGACAACCTATGCCCGGAAAGTAGTGGCTGGGAAAATAGTCGCAGGCCCGCATGTCCGGGCAGCCTGTAACCGGCACCT
GGAAGATTTAGAGCAAGCTCCTTCACGGGGCTTTTTTTTCGACCTGGAAAAAGTGAAGCGCATCATTGGCTTTTGCCGGG
ATGTGCTCAAACTAAACGGTGGCGAATATGAGGGCAAGCCCTATATCCTGTTGGACTGGCAGGCATTCATCGTCGGCAGC
TTGTTCGGCTGGGTCGATGTAGAAGGCTTGAGACGTTTCCGCGTGGCCTATGTAAGCACCGGGAAAGGCAGCGGAAAATC
GCCACTTGCCGCCGCAGTGGGTCTGTATGGTCTGGTGGCAGATGGGGAGGCGCGTGCTGAGTGCTATTCAGCGGCAACAA
AAAAAGATCAGGCCATGATTCTGTTTCGTGATGCAGTGGCGATGGTAGATCAATCTGCCATCCTGCGAGATGCACTGATC
AAAAGTGGAAAAGGATCGACGGTCTGGAACCTTGCTTACCATAAGTCAGGCAGCTTCTTCCGTCCGATCTCGTCCGATGA
TGGACAGTCCGGTCCTCGTCCGCATATCGCACTCATCGATGAGATCCATGAACACAAAAATAATTTCGTGGTGGAGATGA
TGCGGGCCGGTACCAAAAGCCGTCGGCAGGCGTTGATCTTCATGATCACCAACTCAGGGTCGGACAAGACCGGCCCATGT
TGGGATTATCACACTTACGGCACACAGGTAGCTTCTGGACAGTTGACCGACGATTCATTCTTCAGCTACATCTGCGCACT
GGATGAAGGTGATGACCCGATCAACGATGAATCCTGCTGGGACAAAGCCAACCCCAGCCTGAGATTCGGCCTTCCGGGCT
ATCGCTATATCCGTGAACAGGTGCGGGAAGCGAAGGGTATGCCGAGCAAAGAAGCCGTGGTGCGGCGCCTGAATTTTTGT
GAATGGACTGGAGCAGATGCCCCTTGGATCTCGGCAGATGTATGGATGGATGCCCGTCGCGACTATGACTGGCGCAATCT
GCGGAGCCGGCGTGCATGGGGTGGGCTAGATTTGGGATCCACTACAGATCTAACCGGCCTGGTATTGTGGCTGGAACCGG
AAACAGCAGAAGATCCTTGGCAGCTCGTTACGTTTGCCTGGTTGCCGGAACAGGATCTGCTGCGAAAAGAAGAAGTGGAT
CGTGTTCCTTACCTGGCCTGGAAATCCGCCGGCTATCTTGAAACAACCCCTGGCCGTGCAGTCAGCCGCCTGGCCGTCCT
GCGCAGATTGGCAGAATTACAGAATATGTTCGATATCCAATGTATTGCATTTGACAGATGGCGCATCGAGGATCTGAAAC
AAATGGCTGAAGACGAAGGCATCGCCCTGCCGCCGATGGAACCATTCGGGCAGGGATTCAAAGATATGAGCCCGGCGTTG
GACAAGTTTGAAAGTGCATTGCTCAATGGCGAAGTCGTCCATGATGGCAACTCGGTATTCACCTGGTGCGCCGCCAATGC
CGTAACTGTTGCGGACTCTGCAGAAAACCGCAAGCTGAGTAAAAACAAAGCAACCGGCCGGATAGATCTGATGGTGGCTG
CGGTCATGGGTGCGGGGATCGCACTGAACAGCGCGCGTGAAGAATCCGTGGAACCCGCACTCATCATCCTATGA

Upstream 100 bases:

>100_bases
TTCGGCATGTCGCCGGCTGCACGCACACGTATCGCCGTTCAACCGCAACAGACATTACCTGGACTTGAAGAAACATCCGA
AACCTACCTCACGTGATCCG

Downstream 100 bases:

>100_bases
TCAGCTGGCAGGAAGTCCAAAACAAAGCACGCACGCCAGGCAGTGTCGTGCTGAAACAGTGGATGGCACAGCGGGAAGCC
ACACGGATCCAGAATGCCAC

Product: phage terminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MTTYARKVVAGKIVAGPHVRAACNRHLEDLEQAPSRGFFFDLEKVKRIIGFCRDVLKLNGGEYEGKPYILLDWQAFIVGS
LFGWVDVEGLRRFRVAYVSTGKGSGKSPLAAAVGLYGLVADGEARAECYSAATKKDQAMILFRDAVAMVDQSAILRDALI
KSGKGSTVWNLAYHKSGSFFRPISSDDGQSGPRPHIALIDEIHEHKNNFVVEMMRAGTKSRRQALIFMITNSGSDKTGPC
WDYHTYGTQVASGQLTDDSFFSYICALDEGDDPINDESCWDKANPSLRFGLPGYRYIREQVREAKGMPSKEAVVRRLNFC
EWTGADAPWISADVWMDARRDYDWRNLRSRRAWGGLDLGSTTDLTGLVLWLEPETAEDPWQLVTFAWLPEQDLLRKEEVD
RVPYLAWKSAGYLETTPGRAVSRLAVLRRLAELQNMFDIQCIAFDRWRIEDLKQMAEDEGIALPPMEPFGQGFKDMSPAL
DKFESALLNGEVVHDGNSVFTWCAANAVTVADSAENRKLSKNKATGRIDLMVAAVMGAGIALNSAREESVEPALIIL

Sequences:

>Translated_557_residues
MTTYARKVVAGKIVAGPHVRAACNRHLEDLEQAPSRGFFFDLEKVKRIIGFCRDVLKLNGGEYEGKPYILLDWQAFIVGS
LFGWVDVEGLRRFRVAYVSTGKGSGKSPLAAAVGLYGLVADGEARAECYSAATKKDQAMILFRDAVAMVDQSAILRDALI
KSGKGSTVWNLAYHKSGSFFRPISSDDGQSGPRPHIALIDEIHEHKNNFVVEMMRAGTKSRRQALIFMITNSGSDKTGPC
WDYHTYGTQVASGQLTDDSFFSYICALDEGDDPINDESCWDKANPSLRFGLPGYRYIREQVREAKGMPSKEAVVRRLNFC
EWTGADAPWISADVWMDARRDYDWRNLRSRRAWGGLDLGSTTDLTGLVLWLEPETAEDPWQLVTFAWLPEQDLLRKEEVD
RVPYLAWKSAGYLETTPGRAVSRLAVLRRLAELQNMFDIQCIAFDRWRIEDLKQMAEDEGIALPPMEPFGQGFKDMSPAL
DKFESALLNGEVVHDGNSVFTWCAANAVTVADSAENRKLSKNKATGRIDLMVAAVMGAGIALNSAREESVEPALIIL
>Mature_556_residues
TTYARKVVAGKIVAGPHVRAACNRHLEDLEQAPSRGFFFDLEKVKRIIGFCRDVLKLNGGEYEGKPYILLDWQAFIVGSL
FGWVDVEGLRRFRVAYVSTGKGSGKSPLAAAVGLYGLVADGEARAECYSAATKKDQAMILFRDAVAMVDQSAILRDALIK
SGKGSTVWNLAYHKSGSFFRPISSDDGQSGPRPHIALIDEIHEHKNNFVVEMMRAGTKSRRQALIFMITNSGSDKTGPCW
DYHTYGTQVASGQLTDDSFFSYICALDEGDDPINDESCWDKANPSLRFGLPGYRYIREQVREAKGMPSKEAVVRRLNFCE
WTGADAPWISADVWMDARRDYDWRNLRSRRAWGGLDLGSTTDLTGLVLWLEPETAEDPWQLVTFAWLPEQDLLRKEEVDR
VPYLAWKSAGYLETTPGRAVSRLAVLRRLAELQNMFDIQCIAFDRWRIEDLKQMAEDEGIALPPMEPFGQGFKDMSPALD
KFESALLNGEVVHDGNSVFTWCAANAVTVADSAENRKLSKNKATGRIDLMVAAVMGAGIALNSAREESVEPALIIL

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage terminase family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR005021
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF03354 Terminase_1 [H]

EC number: NA

Molecular weight: Translated: 62035; Mature: 61904

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTYARKVVAGKIVAGPHVRAACNRHLEDLEQAPSRGFFFDLEKVKRIIGFCRDVLKLNG
CCCHHHHHHHCCEECCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCC
GEYEGKPYILLDWQAFIVGSLFGWVDVEGLRRFRVAYVSTGKGSGKSPLAAAVGLYGLVA
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHEEE
DGEARAECYSAATKKDQAMILFRDAVAMVDQSAILRDALIKSGKGSTVWNLAYHKSGSFF
CCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEE
RPISSDDGQSGPRPHIALIDEIHEHKNNFVVEMMRAGTKSRRQALIFMITNSGSDKTGPC
CCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCC
WDYHTYGTQVASGQLTDDSFFSYICALDEGDDPINDESCWDKANPSLRFGLPGYRYIREQ
CCCCCCCCEECCCCCCCHHHHHEEEEECCCCCCCCCCCCHHCCCCCEEECCCHHHHHHHH
VREAKGMPSKEAVVRRLNFCEWTGADAPWISADVWMDARRDYDWRNLRSRRAWGGLDLGS
HHHHCCCCHHHHHHHHHCCCEECCCCCCEEEHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
TTDLTGLVLWLEPETAEDPWQLVTFAWLPEQDLLRKEEVDRVPYLAWKSAGYLETTPGRA
CCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCEEEECCCCCEECCCCHH
VSRLAVLRRLAELQNMFDIQCIAFDRWRIEDLKQMAEDEGIALPPMEPFGQGFKDMSPAL
HHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHH
DKFESALLNGEVVHDGNSVFTWCAANAVTVADSAENRKLSKNKATGRIDLMVAAVMGAGI
HHHHHHHHCCEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCC
ALNSAREESVEPALIIL
EECCCHHHCCCCEEEEC
>Mature Secondary Structure 
TTYARKVVAGKIVAGPHVRAACNRHLEDLEQAPSRGFFFDLEKVKRIIGFCRDVLKLNG
CCHHHHHHHCCEECCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCC
GEYEGKPYILLDWQAFIVGSLFGWVDVEGLRRFRVAYVSTGKGSGKSPLAAAVGLYGLVA
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHEEE
DGEARAECYSAATKKDQAMILFRDAVAMVDQSAILRDALIKSGKGSTVWNLAYHKSGSFF
CCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEE
RPISSDDGQSGPRPHIALIDEIHEHKNNFVVEMMRAGTKSRRQALIFMITNSGSDKTGPC
CCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCC
WDYHTYGTQVASGQLTDDSFFSYICALDEGDDPINDESCWDKANPSLRFGLPGYRYIREQ
CCCCCCCCEECCCCCCCHHHHHEEEEECCCCCCCCCCCCHHCCCCCEEECCCHHHHHHHH
VREAKGMPSKEAVVRRLNFCEWTGADAPWISADVWMDARRDYDWRNLRSRRAWGGLDLGS
HHHHCCCCHHHHHHHHHCCCEECCCCCCEEEHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
TTDLTGLVLWLEPETAEDPWQLVTFAWLPEQDLLRKEEVDRVPYLAWKSAGYLETTPGRA
CCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCEEEECCCCCEECCCCHH
VSRLAVLRRLAELQNMFDIQCIAFDRWRIEDLKQMAEDEGIALPPMEPFGQGFKDMSPAL
HHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHH
DKFESALLNGEVVHDGNSVFTWCAANAVTVADSAENRKLSKNKATGRIDLMVAAVMGAGI
HHHHHHHHCCEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCC
ALNSAREESVEPALIIL
EECCCHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]