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The map label for this gene is ctb [H]

Identifier: 114331430

GI number: 114331430

Start: 1523415

End: 1523846

Strand: Reverse

Name: ctb [H]

Synonym: Neut_1441

Alternate gene names: 114331430

Gene position: 1523846-1523415 (Counterclockwise)

Preceding gene: 114331438

Following gene: 114331429

Centisome position: 57.26

GC content: 50.46

Gene sequence:

>432_bases
ATGATACCTCGTCCTATCCCGGAACCTAGTCCCGATCTGTATACCGAAGAAGAAGTTTCAAAACTGGTGCACGAATTTTA
TGCCAAGGCGAGAAAAGATGCTGCATTGGGCCCCATCTTTGAGGAGCATGTGATTGATTGGGATGCACATTTTGTGCAGA
TGATCAATTTCTGGTCAGCACAGTTACGTGGCACCAGCCGTTTTCGTGGTGCGCCCATGCCCAAGCATGTTGCTTTACCT
GAGCTCAGCGCAGCATTATTTAGACGCTGGCTGCAGCTTTTCCGGGAAACGACCCATGAACTGGGGAATCCGGATCTGAA
ACAGCACGCAGATACCGTCGCTGAATTTATCGCCGGACGCCTCTGGATGGGCTATCAGATGAGTCATTTCCCGCATCGTG
AGCCGGTTGGTCTTGATGCTGTAGAAGTATGA

Upstream 100 bases:

>100_bases
TGCAAATATGAGAAAATGGTCGTTTCAGGCTGTCGGATCATTATTCAAACTATCTGATATGCGCGAACTTTAATCCAACA
AATATATTAAACACAACGTC

Downstream 100 bases:

>100_bases
AAAATAATAAATCTACGCTACTGAGATCGTCATGGAACAGTCATCAGGCTGTCACGAGGTAGCTATCCAACCAGAGTATA
TTTCCGGTCGATCAGTCATC

Product: putative sec-independent protein translocase protein TatC

Products: NA

Alternate protein names: Cj-trHbP; Truncated Hb [H]

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MIPRPIPEPSPDLYTEEEVSKLVHEFYAKARKDAALGPIFEEHVIDWDAHFVQMINFWSAQLRGTSRFRGAPMPKHVALP
ELSAALFRRWLQLFRETTHELGNPDLKQHADTVAEFIAGRLWMGYQMSHFPHREPVGLDAVEV

Sequences:

>Translated_143_residues
MIPRPIPEPSPDLYTEEEVSKLVHEFYAKARKDAALGPIFEEHVIDWDAHFVQMINFWSAQLRGTSRFRGAPMPKHVALP
ELSAALFRRWLQLFRETTHELGNPDLKQHADTVAEFIAGRLWMGYQMSHFPHREPVGLDAVEV
>Mature_143_residues
MIPRPIPEPSPDLYTEEEVSKLVHEFYAKARKDAALGPIFEEHVIDWDAHFVQMINFWSAQLRGTSRFRGAPMPKHVALP
ELSAALFRRWLQLFRETTHELGNPDLKQHADTVAEFIAGRLWMGYQMSHFPHREPVGLDAVEV

Specific function: Has been suggested to be involved in cytochrome c peroxidase or P450-like oxygen chemistry or cyanide detoxification. The high oxygen affinity of this protein suggests that it probably does not function as an oxygen transporter [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group III subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 16516; Mature: 16516

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPRPIPEPSPDLYTEEEVSKLVHEFYAKARKDAALGPIFEEHVIDWDAHFVQMINFWSA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QLRGTSRFRGAPMPKHVALPELSAALFRRWLQLFRETTHELGNPDLKQHADTVAEFIAGR
HHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LWMGYQMSHFPHREPVGLDAVEV
HHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIPRPIPEPSPDLYTEEEVSKLVHEFYAKARKDAALGPIFEEHVIDWDAHFVQMINFWSA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QLRGTSRFRGAPMPKHVALPELSAALFRRWLQLFRETTHELGNPDLKQHADTVAEFIAGR
HHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LWMGYQMSHFPHREPVGLDAVEV
HHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]