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The map label for this gene is iscR [H]

Identifier: 114331239

GI number: 114331239

Start: 1299146

End: 1299613

Strand: Reverse

Name: iscR [H]

Synonym: Neut_1243

Alternate gene names: 114331239

Gene position: 1299613-1299146 (Counterclockwise)

Preceding gene: 114331242

Following gene: 114331238

Centisome position: 48.84

GC content: 49.57

Gene sequence:

>468_bases
ATGAGATTAACAACAAAGGGGCGGTTTGCGGTAACAGCACTTCTGGATATCGCGATACGGCATGGGGGTGGACCAGTTGC
ATTGGCAGATATCAGTGAACGACAAAGAATTTCGCTGTCTTATCTGGAACAGCTGTTTTCCAAGTTGCGTCAGCGGAAGT
TGGTTGACAGCGTGCGCGGGCCCGGCGGAGGGTATTGTCTGGCCAAAGGATTGGATGAGGTATCGGTGGCCGACATTATT
TTGGCTGTGGATGAGCCCATCGATAGCACGCAATGTGGTGGTAAGGAAAACTGTCTGGGCGACAGTAAATGCATGACCCA
TGATTTATGGACAAAGCTGAATGAGATCATATTTGATTATCTTGGCAATGTCACCCTGGAACGGCTGGTGGAGGAGCAGA
GTCAGCGCGAACTACAGCGTGAACAGGCAGTAGTTAAATTATATGACATGCGGGAAGCTGCATTCTGA

Upstream 100 bases:

>100_bases
TAGTTGACTAATATAGTCAGGTATTATATAGTTTCGTTTTTGGGGAAAATCAGCGGTAAGTGGTTCTAATCGCTTTAAAA
TTACATGCTAAGAGGTTGAA

Downstream 100 bases:

>100_bases
TTATTTGTTTGCAATAGAGTGAATTATGGCGATTACATTAACTGAGCGTGCGGCCAGACAGATTCAGCATCAACTGGGCA
AGCGAGGTAGAGGGGTGGCG

Product: transcriptional regulator, BadM/Rrf2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MRLTTKGRFAVTALLDIAIRHGGGPVALADISERQRISLSYLEQLFSKLRQRKLVDSVRGPGGGYCLAKGLDEVSVADII
LAVDEPIDSTQCGGKENCLGDSKCMTHDLWTKLNEIIFDYLGNVTLERLVEEQSQRELQREQAVVKLYDMREAAF

Sequences:

>Translated_155_residues
MRLTTKGRFAVTALLDIAIRHGGGPVALADISERQRISLSYLEQLFSKLRQRKLVDSVRGPGGGYCLAKGLDEVSVADII
LAVDEPIDSTQCGGKENCLGDSKCMTHDLWTKLNEIIFDYLGNVTLERLVEEQSQRELQREQAVVKLYDMREAAF
>Mature_155_residues
MRLTTKGRFAVTALLDIAIRHGGGPVALADISERQRISLSYLEQLFSKLRQRKLVDSVRGPGGGYCLAKGLDEVSVADII
LAVDEPIDSTQCGGKENCLGDSKCMTHDLWTKLNEIIFDYLGNVTLERLVEEQSQRELQREQAVVKLYDMREAAF

Specific function: Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=133, Percent_Identity=58.6466165413534, Blast_Score=147, Evalue=3e-37,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17287; Mature: 17287

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTTKGRFAVTALLDIAIRHGGGPVALADISERQRISLSYLEQLFSKLRQRKLVDSVRG
CCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGGYCLAKGLDEVSVADIILAVDEPIDSTQCGGKENCLGDSKCMTHDLWTKLNEIIFDY
CCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LGNVTLERLVEEQSQRELQREQAVVKLYDMREAAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLTTKGRFAVTALLDIAIRHGGGPVALADISERQRISLSYLEQLFSKLRQRKLVDSVRG
CCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGGYCLAKGLDEVSVADIILAVDEPIDSTQCGGKENCLGDSKCMTHDLWTKLNEIIFDY
CCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LGNVTLERLVEEQSQRELQREQAVVKLYDMREAAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA