| Definition | Shewanella sp. MR-7 chromosome, complete genome. |
|---|---|
| Accession | NC_008322 |
| Length | 4,792,610 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 114047350
GI number:
Start: 2175305
End: 2179114
Strand: Reverse
Name: Not Available
Synonym: Shewmr7_1852
Alternate gene names: NA
Gene position: NA
Preceding gene: 114047351
Following gene: 114047349
Centisome position: NA
GC content: NA
Gene sequence:
>3810_bases ATGACTAAGGTATCACCCGCTTTGCCGTTAGATCCGCTCACCCTGCCATTTGGCGGCAGTCGCTTAATCGAGGCCAGTGC GGGCACGGGTAAAACCTATACCATTTCAGGCCTGTATCTCAGATTACTGCTTGGGGATGGCTTAAGCGAACCGCTTAATT GTGAACAAATTCTGGTCGTGACCTTTACCAATGCCGCCACCGAGGAGCTGCGGGACAGAATTCGCCGCCGCATTCAGGTG GCCTTTAAGTGTTTCTTAGGGCTTGAGATTAACGATCCTTTTGTGCAGGCGCTGTACGATAAGACCCCTGAAGCCGAGCG CGCTATCGCCCTAAGACGCTTCGATTTGGCGCTCAAATCCCTCGACGAAGCGGCGATTTTTACCATTCACGGATTTTGCC AACGGATCTTGGCCGATCTCGCCTTCGAGTCATCATTGTTGTTCGAGTCGGATTTTACCTTGGACGACAGTGAGTTTTTG CACCATGCGGTGCGGGATTTTTGGCGTGAGGCCTGTTATCCGCTGCCGGAGTATTTAGCCCAAATTATTGCCAGCGAATT TGGCGATCCCGACGGATTAGTCAAGCAGCTGAGAGCATTGCTCGGTGCCAGTGAGGCCAAACCGCTTCAACCCGTGCAGC CCTTTGCTCGTTTGGCAGAGTCCTTAAGCCAGAGTGTGCAGCGCTTTAAACTCGCTTGGCCGCGTGGCCGCGACGCGCTG TTAGAGTTACTTCATAGCCTGCCGCTTAACGGTCAACGTTTTGGTAAGGCAAGCGACAATTACCCCAAATTGGCGGAAAT GTTCGACCAACTGGACAACTTCTTAGCCTTTGGCCACGGCTTGCCGCCGCTTAAAGTGCTCGAAGCGCTGTCGTTATCCG AGCTTAAGCTGAATAAAGGCGGCGTGCTCCCAAGTGCGAGCGAGGCGCCACTGCTTGATCATATGGAGCAGTTAGCCGCG TTGATTAACGCGATAAAACCCGCATTTCTCTACAGCGCCAAACAAGGGATCAGCGAGCGCTTTGCCAAGCAAAAACAGCA GAAAAATGTACTGACACCCGATGATCTGCTCACTACTTTGGCCGCAGCAATGCAGGCCAATCCCGACACTTTGCCTAAGG CAGTGGCGAGCCGCTTCCCCGTGGCGCTTATCGATGAGTTCCAAGATACGGATCCACTGCAATTTGCTATTTTCTCAGGG ATCTATCAAACCCGTTTGGGGATTGATACTCAAGATCCGGCTGCTGAACCTAAGCCTCGCACGGATAGCAAATTAAGCCT GCTGATGATTGGCGACCCTAAACAGGCGATTTATGCTTTCCGCGGCGCCGATATTTACACCTATATCGAGGCGCGCAGAC AAACCCAGGCGCACTATTTCCTCGACACTAACTATCGCTCGAGTCGCAATCTGGTTATGGGGGTGAATCATTTATTTGCC CAGCATTCGGATCCTTTTATCAGCCAATCAATTCCCTTCGATCCAGTCAAAACACCTGCCAGTGCGGCAGCCAAACAACT CGTTGAGCATGCGCCCAATAGCGCCGCGCTACGGTTAAAACTCTTGAGTGAAGGCGAAACTGGACTTAATAAGGCCAGTG CGCGGCAAACCTTGGCCGAAGACACCGCCGCCGAAATCACCCGTTTACTGACGCAGGCCGTCAATGGTCAATGCAGCACG CCCAAAGGGCCATTAATTGCCAAAGATATCGCCATCTTAGTACGCGATAGAAACGAAGCGGCCGTGATGAAAACCGCGCT GAGCAAGCGCCAGATTGGTGCCGTCTTTTTAAGTCGCGACAGCGTATTTGAAACCGTCGAAGCGCGGGAAATGGCGCTCA TTCTGCGCGCCTTGGCCAGCCCCAAGGACGAGCGCGCCCTGCGTAGCGCCCTTGCGACCGCCCTGCTTGGTTATCGCGCC GAACAAATTCATGCCTTTAACCAAGATGAAGAGCAGCGCCAAAGGCTGCTAGAGCAGTTTTTTGAGCTGCACCAGATCTG GCAAAAACGCGGCATTATGCCGGCGCTGCTCAGCCTAGCCAATGCCACCCAGATGGTTGCGCGGCGGCTGCATTCTCCCG CTTCGACAAGCACTGACCAAGCGGAGCAAGATGCGGAAGTTCATCTTGAGGCGAACAATGGCGAACGTCGACTCACGGAT TTTCGCCACTTAGCCGAGCTGTTGCAGCAAAAGGCGACCGAAATTGATGGGATGAGTGCCCTGCTCAACTGGTATGAGCA ACAACTGATTGATAATACAGGGACAGATGAGCAGCAGCTACGCCTTGAAAGCGAGCAAAACTTAGTGCAAATCGTCACTA TCCATAAGAGTAAGGGGCTGGAATACCCAGTGTGCTTCGTGCCCTTTGTCAGCCTCGCGCGGGATAATCGCCGCCGCCTG ACACCTATGCTCTACCACAGAACCAATGCCGATGGCGCGCAGGAACTGGTGTGGGATTTAGAAGGCACGGATGAAGGTTG GGAACAGGCAAAGCAGGAAACCTTAGCCGAAGATCTGCGTCTGCTCTACGTGGCGCTCACCCGCCCCGTGTACCTGTGTT ATTTGTACATCGCCAACCATAGCCGCATGTTAAAGGCAGGGCTTAAAAGCCAGCTGCATGAAACCGCCATCGGTTATTTG CTTGGGATCACTGACACTGATTGTGATTTTTCGCGTCTGCAACATGCCGCCAAGGCGCTGGTCGCGGGTCTCGAGTCGAG TCAGCCTGCGATCAGCATTGAGGTGGTGGCCGATGACATTGAGGCTAACAAGCTGCATACGGGGGGAAGTGATTCTCATA CCTTGAGTGCCCGTAAGGTCAGCCGTCAGTATCGCACCCCATGGCGCGTCGGCAGTTATTCCGGTTTAGTTAAAAATGCG CCCCACGCTAAAGCCACACCCGGCGCCGATGATGAAGTCAACGCCGTATTGGGTACAGATACCGCAAACAGCGCAGCTGA TCCCTTGTGGCAAGAGGCTTTGTTGCAAGAGGCTGCCGATACACAAGCGCAACCTCTGCTTAATCGCTTTAGTTTTGAGC GCGGCGCCAACGCGGGTAGCTTTATGCACTTAGTGCTTGAGTTAATTGATTTTACCCAAGCTCCAATCGACCTACCCCGA GAGCTACCTAAGGCCATGTTGCAATATGGCATTGCCCCCGAGTGGCAACCCGTATTAGAAGATTGGTACCTTGAGGTATT GCAAGCTCCGCTGGCGTTAATGGCGCAGGATAATCAACTTATCAATCCCGAACTCTGTTTAGCCGCACTCGCGCCGCAGC ACACCTTAGTCGAGATGGAGTTTTACCTGCCTCTGAATCGCTTAAAGGATACTGAGCTTAACCAACTCCTTAGGCAATTT GGCTACGATACCGAGCTGCAGTTTGACGAGTTACAGGGCATGCTTAAGGGCTTTATCGACTTAACCTTTGAATATCAAGG AAAGTTTTATATAGCAGACTATAAGTCGAACCATCTGGGGGATAATATTCAGGCCTATCATCATAGCGCGCTAAAACAGG CGATTAGCGACCATAGGTATGATTTGCAATATATTCTCTACTCCCTTGCGCTGCACCGCTATTTAGCGATGCGCTTGCCC AATTATGATTACGATACCCATATTGGCGGCTGTTATTATTTGTTTTTACGGGGAATGTCGGTGCAATATCCAGGCTTTGG TATTTATTACGATAAACCGCCCAAGGCGCTAATTTTGGCCTTAGATGCGCTGTTTCAGCGCAGTCTAGAGGCAACAACTG ACTCAAATAAAAAGTCCGATGCTCAACTGGATACGGGAGCAATGGCATGA
Upstream 100 bases:
>100_bases ATCGGCCAATGCTTAGCCTGTATCACAAGGATACCCTCGCCCAACTCGAGGAATTTGCCCTGAATGAAGCCCCAACCGCC ACAACAGAGGGAGCGCACTG
Downstream 100 bases:
>100_bases TTAGCAGCGCACTCAATCCCCCTAAAGCCCCATCAATCCCATGGGTCGAAGCTGGCGCGCTCAGACTCAAGGCGCCGCTC ACAAAGCTACTCAAATACTG
Product: exodeoxyribonuclease V subunit beta
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1269_residues MTKVSPALPLDPLTLPFGGSRLIEASAGTGKTYTISGLYLRLLLGDGLSEPLNCEQILVVTFTNAATEELRDRIRRRIQV AFKCFLGLEINDPFVQALYDKTPEAERAIALRRFDLALKSLDEAAIFTIHGFCQRILADLAFESSLLFESDFTLDDSEFL HHAVRDFWREACYPLPEYLAQIIASEFGDPDGLVKQLRALLGASEAKPLQPVQPFARLAESLSQSVQRFKLAWPRGRDAL LELLHSLPLNGQRFGKASDNYPKLAEMFDQLDNFLAFGHGLPPLKVLEALSLSELKLNKGGVLPSASEAPLLDHMEQLAA LINAIKPAFLYSAKQGISERFAKQKQQKNVLTPDDLLTTLAAAMQANPDTLPKAVASRFPVALIDEFQDTDPLQFAIFSG IYQTRLGIDTQDPAAEPKPRTDSKLSLLMIGDPKQAIYAFRGADIYTYIEARRQTQAHYFLDTNYRSSRNLVMGVNHLFA QHSDPFISQSIPFDPVKTPASAAAKQLVEHAPNSAALRLKLLSEGETGLNKASARQTLAEDTAAEITRLLTQAVNGQCST PKGPLIAKDIAILVRDRNEAAVMKTALSKRQIGAVFLSRDSVFETVEAREMALILRALASPKDERALRSALATALLGYRA EQIHAFNQDEEQRQRLLEQFFELHQIWQKRGIMPALLSLANATQMVARRLHSPASTSTDQAEQDAEVHLEANNGERRLTD FRHLAELLQQKATEIDGMSALLNWYEQQLIDNTGTDEQQLRLESEQNLVQIVTIHKSKGLEYPVCFVPFVSLARDNRRRL TPMLYHRTNADGAQELVWDLEGTDEGWEQAKQETLAEDLRLLYVALTRPVYLCYLYIANHSRMLKAGLKSQLHETAIGYL LGITDTDCDFSRLQHAAKALVAGLESSQPAISIEVVADDIEANKLHTGGSDSHTLSARKVSRQYRTPWRVGSYSGLVKNA PHAKATPGADDEVNAVLGTDTANSAADPLWQEALLQEAADTQAQPLLNRFSFERGANAGSFMHLVLELIDFTQAPIDLPR ELPKAMLQYGIAPEWQPVLEDWYLEVLQAPLALMAQDNQLINPELCLAALAPQHTLVEMEFYLPLNRLKDTELNQLLRQF GYDTELQFDELQGMLKGFIDLTFEYQGKFYIADYKSNHLGDNIQAYHHSALKQAISDHRYDLQYILYSLALHRYLAMRLP NYDYDTHIGGCYYLFLRGMSVQYPGFGIYYDKPPKALILALDALFQRSLEATTDSNKKSDAQLDTGAMA
Sequences:
NA
Specific function: NA
COG id: COG1074
COG function: function code L; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA