| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477580
Identifier: 113477580
GI number: 113477580
Start: 6422438
End: 6423289
Strand: Reverse
Name: 113477580
Synonym: Tery_4162
Alternate gene names: NA
Gene position: 6423289-6422438 (Counterclockwise)
Preceding gene: 113477581
Following gene: 113477571
Centisome position: 82.88
GC content: 32.86
Gene sequence:
>852_bases ATGGTACAGTATGAATATATAGAATGTAAAAACCCAAACGGTCAACATCGGATAGCTTATACTCAATGGGGTAATCCTGA AAATAAAAGAGTATTAATTTGTGTTCATGGTTTTAGTCGTACAGGGAGAGATTTTGACTATTTAGCAGCTACCTTGCAGC AAAAATATCGAGTTATTTGCCCAGATATAGTAGGCAGAGGGAAAAGTGATTGGCTATTCAATTCATCTGATTATGGTCTA CCTCTTTATATCTCAGATATGTTAACTTTAATTAATCAACTACATCTAAGTAATGTTGATTGGATAGGAACATCAATGGG AGGCTTAATTGGAATGTTTATTGCCTCTCAAAACAATTCTTTAATTAACAGATTGGTTATGAATGATGTTGGTCCAGAGA TTTTTCCTGAAAACTTGAGACGTTGGGCAGGACAATATTTAAGTCAAGACAGATCTGATTTTGAAAATTTGACTCAAGTA ACAGAATATGTGAAAAAATTTTATTCTGGTTATGGTGCTTTAACTGATTCAGAATGGGAACATATAGCTAAACATACTGT AAAAAAGACTTCCGAAGACAAATATCAATTACACTACGATTTTTCCATTATAGATATATTTAGATCTAATGTAGGTGAAC CTAAGCCAATTGATTTTTGGCAAACTTGGTCATCAGTAAGTTGTCCGGTATTATTGTTACATGGTGAAGAATCTTATTTA TTGTTACCAAAAACTATTGAGAAAATGCAATCTATTCATCCTCAAATAAATGTTAAGCATTTTCCTTGTGGTCATAACCC GCCTTTATTATCAAAAGAGCAAATAGGAACGATCGCTGACTGGCTGAATTAA
Upstream 100 bases:
>100_bases TTCATATAATTCTACTACAATTAGAGCTTTTGCGTAAGTCCTAATTTATATTGCGTATTTATATTATCAAGAAAAATTGT AATTCTCTTTAAGAAAGATC
Downstream 100 bases:
>100_bases GAAATTTTTACTAACGCTAGACCAGTATCGACTTTAACAGACACGACTTAGGTAGGAACTGGGTTGGTAACAAAATTTGC CATCGAATTGCGAAAAACAA
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Hydrolase Protein; Alpha/Beta Hydrolase Fold Family Protein; Esterase/Lipase/Thioesterase Family Protein; Hydrolase/Acyltransferase; D-(-)-3-Hydroxybutyrate Oligomer Hydrolase; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Cation Diffusion Facilitator Family Transporter; 3-Oxoadipate Enol-Lactonase; Hydrolases Or Acyltransferases; Hydroxybutyrate-Dimer Hydrolase Protein; Alpha/Beta Hydrolase Fold Family; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase / Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MVQYEYIECKNPNGQHRIAYTQWGNPENKRVLICVHGFSRTGRDFDYLAATLQQKYRVICPDIVGRGKSDWLFNSSDYGL PLYISDMLTLINQLHLSNVDWIGTSMGGLIGMFIASQNNSLINRLVMNDVGPEIFPENLRRWAGQYLSQDRSDFENLTQV TEYVKKFYSGYGALTDSEWEHIAKHTVKKTSEDKYQLHYDFSIIDIFRSNVGEPKPIDFWQTWSSVSCPVLLLHGEESYL LLPKTIEKMQSIHPQINVKHFPCGHNPPLLSKEQIGTIADWLN
Sequences:
>Translated_283_residues MVQYEYIECKNPNGQHRIAYTQWGNPENKRVLICVHGFSRTGRDFDYLAATLQQKYRVICPDIVGRGKSDWLFNSSDYGL PLYISDMLTLINQLHLSNVDWIGTSMGGLIGMFIASQNNSLINRLVMNDVGPEIFPENLRRWAGQYLSQDRSDFENLTQV TEYVKKFYSGYGALTDSEWEHIAKHTVKKTSEDKYQLHYDFSIIDIFRSNVGEPKPIDFWQTWSSVSCPVLLLHGEESYL LLPKTIEKMQSIHPQINVKHFPCGHNPPLLSKEQIGTIADWLN >Mature_283_residues MVQYEYIECKNPNGQHRIAYTQWGNPENKRVLICVHGFSRTGRDFDYLAATLQQKYRVICPDIVGRGKSDWLFNSSDYGL PLYISDMLTLINQLHLSNVDWIGTSMGGLIGMFIASQNNSLINRLVMNDVGPEIFPENLRRWAGQYLSQDRSDFENLTQV TEYVKKFYSGYGALTDSEWEHIAKHTVKKTSEDKYQLHYDFSIIDIFRSNVGEPKPIDFWQTWSSVSCPVLLLHGEESYL LLPKTIEKMQSIHPQINVKHFPCGHNPPLLSKEQIGTIADWLN
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32640; Mature: 32640
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQYEYIECKNPNGQHRIAYTQWGNPENKRVLICVHGFSRTGRDFDYLAATLQQKYRVIC CCEEEEEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHEEEC PDIVGRGKSDWLFNSSDYGLPLYISDMLTLINQLHLSNVDWIGTSMGGLIGMFIASQNNS HHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH LINRLVMNDVGPEIFPENLRRWAGQYLSQDRSDFENLTQVTEYVKKFYSGYGALTDSEWE HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH HIAKHTVKKTSEDKYQLHYDFSIIDIFRSNVGEPKPIDFWQTWSSVSCPVLLLHGEESYL HHHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEEECCCCEE LLPKTIEKMQSIHPQINVKHFPCGHNPPLLSKEQIGTIADWLN ECHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MVQYEYIECKNPNGQHRIAYTQWGNPENKRVLICVHGFSRTGRDFDYLAATLQQKYRVIC CCEEEEEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHEEEC PDIVGRGKSDWLFNSSDYGLPLYISDMLTLINQLHLSNVDWIGTSMGGLIGMFIASQNNS HHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH LINRLVMNDVGPEIFPENLRRWAGQYLSQDRSDFENLTQVTEYVKKFYSGYGALTDSEWE HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH HIAKHTVKKTSEDKYQLHYDFSIIDIFRSNVGEPKPIDFWQTWSSVSCPVLLLHGEESYL HHHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEEECCCCEE LLPKTIEKMQSIHPQINVKHFPCGHNPPLLSKEQIGTIADWLN ECHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA