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The map label for this gene is arnC [H]

Identifier: 113477515

GI number: 113477515

Start: 6315001

End: 6316008

Strand: Reverse

Name: arnC [H]

Synonym: Tery_4095

Alternate gene names: 113477515

Gene position: 6316008-6315001 (Counterclockwise)

Preceding gene: 113477516

Following gene: 113477514

Centisome position: 81.5

GC content: 34.62

Gene sequence:

>1008_bases
ATGAGTAACCACCTACATATTCAAGAGATAGAGCTATATAAAGGTTCCCCTACTCAATTAGATATATCTATTGTGACGCC
TATTTACAATGAAGTTGCTAGTATTCCTCAACTACTGACAAATATTTCTACTACTTTAATAGAAAATAAACTTACTTACG
AAATTATCTGTGTAGATGATGGTTCTCAGGATGGTTCAACAAAACTTCTAACAGAATTAGCTCAAAAACGTACAGATTTA
AAAGTAGTAATTCTCCGTCGAAATTATGGGCAAACTGCAGCTATGGCAGCAGGATTTAAGCATGCTACTGGTAAAATAGT
TGTGACTTTAGATGGAGATTTACAGAACGACCCTGCAGATATTCCACTATTATTATCTAAGCTAGATGAAGGTTATGATT
TGGTGAGTGGATGGCGAAAAAATAGGCAAGATAATTTTGTTACACGACTACTTCCTTCTAAAATTGCTAATTGGATAATT
GCCAAAGTAACAGGAGTCAATTTACATGATTATGGCTGTTCTTTAAAAGCTTATCGTTTGGAGTTAGTTGCTGATATGAA
CCTTTATGGTGAATTACATAGATTTTTACCCGCTTTAGCTTTTATTGAAGGAGCAAGAATTGCAGAAATACCAGTTAACC
ACTATGCTCGTTGCTATGGTAAAAGTAAGTATGGGTTAGGGCGAACTTTTCGAGTTGTTATGGATTTATTAACGGTATTT
TTTATGAAGAAATTCCTCACTAGACCTATGCACATTTTTGGAATGTTAGGTTTAGTTTCTGGGGGGTTAGGGTTAGTTTT
TGGGATTTATTTAACTATTTTAAAACTTGGCTTTGGTGAGAATATTGGCGATCGCCCTCTACTAATTTTGGTTGTTGTTT
TATTACTAGCTGGTTTACAATTATTCAGTTTTGGTTTATTAGCAGAGTTACTCATGCGAACTTATCACGAATCTCAAGAA
CGTCCAATTTATCGAGTGCGAGAAGTTATTAGCAAAATTAGGGAGTAG

Upstream 100 bases:

>100_bases
ATAAATTTTATAAGTTGTCAGTATGGATACTTGATAGTAAAAGACTTAAACTAAATGCTTAAAACTAAACTTTCTCAAAA
AATTGGATGAATAATTAATA

Downstream 100 bases:

>100_bases
AGAGTAAGAGGAAATAATTGATAAAAAAAAGTACGATTCTAAGAAATGCAATGCCTCTGTATAGGAAGACTCAAAATTCA
TTAAAAATGCCATAATCAAG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSNHLHIQEIELYKGSPTQLDISIVTPIYNEVASIPQLLTNISTTLIENKLTYEIICVDDGSQDGSTKLLTELAQKRTDL
KVVILRRNYGQTAAMAAGFKHATGKIVVTLDGDLQNDPADIPLLLSKLDEGYDLVSGWRKNRQDNFVTRLLPSKIANWII
AKVTGVNLHDYGCSLKAYRLELVADMNLYGELHRFLPALAFIEGARIAEIPVNHYARCYGKSKYGLGRTFRVVMDLLTVF
FMKKFLTRPMHIFGMLGLVSGGLGLVFGIYLTILKLGFGENIGDRPLLILVVVLLLAGLQLFSFGLLAELLMRTYHESQE
RPIYRVREVISKIRE

Sequences:

>Translated_335_residues
MSNHLHIQEIELYKGSPTQLDISIVTPIYNEVASIPQLLTNISTTLIENKLTYEIICVDDGSQDGSTKLLTELAQKRTDL
KVVILRRNYGQTAAMAAGFKHATGKIVVTLDGDLQNDPADIPLLLSKLDEGYDLVSGWRKNRQDNFVTRLLPSKIANWII
AKVTGVNLHDYGCSLKAYRLELVADMNLYGELHRFLPALAFIEGARIAEIPVNHYARCYGKSKYGLGRTFRVVMDLLTVF
FMKKFLTRPMHIFGMLGLVSGGLGLVFGIYLTILKLGFGENIGDRPLLILVVVLLLAGLQLFSFGLLAELLMRTYHESQE
RPIYRVREVISKIRE
>Mature_334_residues
SNHLHIQEIELYKGSPTQLDISIVTPIYNEVASIPQLLTNISTTLIENKLTYEIICVDDGSQDGSTKLLTELAQKRTDLK
VVILRRNYGQTAAMAAGFKHATGKIVVTLDGDLQNDPADIPLLLSKLDEGYDLVSGWRKNRQDNFVTRLLPSKIANWIIA
KVTGVNLHDYGCSLKAYRLELVADMNLYGELHRFLPALAFIEGARIAEIPVNHYARCYGKSKYGLGRTFRVVMDLLTVFF
MKKFLTRPMHIFGMLGLVSGGLGLVFGIYLTILKLGFGENIGDRPLLILVVVLLLAGLQLFSFGLLAELLMRTYHESQER
PIYRVREVISKIRE

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=243, Percent_Identity=30.4526748971193, Blast_Score=96, Evalue=4e-20,
Organism=Escherichia coli, GI1788588, Length=311, Percent_Identity=39.871382636656, Blast_Score=223, Evalue=1e-59,
Organism=Escherichia coli, GI1788692, Length=313, Percent_Identity=26.1980830670927, Blast_Score=127, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI71999402, Length=241, Percent_Identity=27.3858921161826, Blast_Score=73, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6325441, Length=112, Percent_Identity=31.25, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24585265, Length=230, Percent_Identity=30.8695652173913, Blast_Score=88, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 37614; Mature: 37483

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNHLHIQEIELYKGSPTQLDISIVTPIYNEVASIPQLLTNISTTLIENKLTYEIICVDD
CCCCCEEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
GSQDGSTKLLTELAQKRTDLKVVILRRNYGQTAAMAAGFKHATGKIVVTLDGDLQNDPAD
CCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCC
IPLLLSKLDEGYDLVSGWRKNRQDNFVTRLLPSKIANWIIAKVTGVNLHDYGCSLKAYRL
HHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCEECCCCCCHHHHHH
ELVADMNLYGELHRFLPALAFIEGARIAEIPVNHYARCYGKSKYGLGRTFRVVMDLLTVF
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
FMKKFLTRPMHIFGMLGLVSGGLGLVFGIYLTILKLGFGENIGDRPLLILVVVLLLAGLQ
HHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LFSFGLLAELLMRTYHESQERPIYRVREVISKIRE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNHLHIQEIELYKGSPTQLDISIVTPIYNEVASIPQLLTNISTTLIENKLTYEIICVDD
CCCCEEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
GSQDGSTKLLTELAQKRTDLKVVILRRNYGQTAAMAAGFKHATGKIVVTLDGDLQNDPAD
CCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCC
IPLLLSKLDEGYDLVSGWRKNRQDNFVTRLLPSKIANWIIAKVTGVNLHDYGCSLKAYRL
HHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCEECCCCCCHHHHHH
ELVADMNLYGELHRFLPALAFIEGARIAEIPVNHYARCYGKSKYGLGRTFRVVMDLLTVF
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
FMKKFLTRPMHIFGMLGLVSGGLGLVFGIYLTILKLGFGENIGDRPLLILVVVLLLAGLQ
HHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LFSFGLLAELLMRTYHESQERPIYRVREVISKIRE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA