| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477500
Identifier: 113477500
GI number: 113477500
Start: 6294635
End: 6294895
Strand: Reverse
Name: 113477500
Synonym: Tery_4079
Alternate gene names: NA
Gene position: 6294895-6294635 (Counterclockwise)
Preceding gene: 113477504
Following gene: 113477499
Centisome position: 81.22
GC content: 30.65
Gene sequence:
>261_bases ATGTCTAATTTGCGCTGGCTAATTCTTAGTTCTTCTGCCTCTGGAGCTGGTCTTGTTTCCATTGGATCTTTAATTATTAG TTTATCCCATAAATCTACTTTAGTAGGTTTTTTATTTCTATTTTTTGTCTTAACTGTTTTTACAATAAATGTAATATTGA CGGCTCATTATTATTCTAAAATTTCTAGGCAGCTATACATCAAAAATAAGATGCAAACACAAATGAAGATGAGGGCAAAA CCTACAAGATATCGATACTAA
Upstream 100 bases:
>100_bases ATGGGGTAAATAGTTTATCAGATATAATTACTGATTGCTATATGATTAAATAATTATTATTAACAGTCTTAATTAATCAA AAATATTTATTAACTTAACT
Downstream 100 bases:
>100_bases ATTTTGAGGTAATAAATAATTTCAGACAATAATATGGGGCACTAAATCCAGACATATGAGAGAATATTCGATAAACCTCT TCTTTTCTAAAGTATTTATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MSNLRWLILSSSASGAGLVSIGSLIISLSHKSTLVGFLFLFFVLTVFTINVILTAHYYSKISRQLYIKNKMQTQMKMRAK PTRYRY
Sequences:
>Translated_86_residues MSNLRWLILSSSASGAGLVSIGSLIISLSHKSTLVGFLFLFFVLTVFTINVILTAHYYSKISRQLYIKNKMQTQMKMRAK PTRYRY >Mature_85_residues SNLRWLILSSSASGAGLVSIGSLIISLSHKSTLVGFLFLFFVLTVFTINVILTAHYYSKISRQLYIKNKMQTQMKMRAKP TRYRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9852; Mature: 9721
Theoretical pI: Translated: 11.42; Mature: 11.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLRWLILSSSASGAGLVSIGSLIISLSHKSTLVGFLFLFFVLTVFTINVILTAHYYSK CCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISRQLYIKNKMQTQMKMRAKPTRYRY HHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SNLRWLILSSSASGAGLVSIGSLIISLSHKSTLVGFLFLFFVLTVFTINVILTAHYYSK CCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISRQLYIKNKMQTQMKMRAKPTRYRY HHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA