Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477485

Identifier: 113477485

GI number: 113477485

Start: 6273647

End: 6273985

Strand: Reverse

Name: 113477485

Synonym: Tery_4061

Alternate gene names: NA

Gene position: 6273985-6273647 (Counterclockwise)

Preceding gene: 113477490

Following gene: 113477483

Centisome position: 80.95

GC content: 34.22

Gene sequence:

>339_bases
ATGACTATAAATATTGCAATAATAGCAGCGATCGCCTATGGTATGTTAGCCATTATTGGAGGCATTATTGGATACACAAA
AGTAGGCAGCAAAATATCCTTAATATCTGGTAGTATAAGCGGCTTGCTACTAATTATTAGCGGAATCATTCAACTGATGG
GCATAAATTGGGGTCTCACATTTTCTACCATTATTACAACTATCCTAATCATTACATTCATGATACGTTTAGCAAAAACT
CGTAAAATGATGCCTGGGGGATTAATGATTTTCACTGGTATTGTTGCTGTAGCAGTTATGGTTTATGAAATTAGTATAAA
AAATTCAGCCACAACTTAA

Upstream 100 bases:

>100_bases
ATTGAACCTTAATGATGCAATATTAATTTTTAATAAATTAGCTAGCTATTTGCGCAAGTAAGCTGTATAAATTAGTTTGA
GTTTTTGGAAGATCATAAAA

Downstream 100 bases:

>100_bases
ATTAAAACCTAGAAGTATGAAAATATATGGCAATAGAGTTGCCCAGAGTTGCTCGAAAAATAAATTGATAAGCTTCAGCA
ACCAAGCCTTTTCTGTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MTINIAIIAAIAYGMLAIIGGIIGYTKVGSKISLISGSISGLLLIISGIIQLMGINWGLTFSTIITTILIITFMIRLAKT
RKMMPGGLMIFTGIVAVAVMVYEISIKNSATT

Sequences:

>Translated_112_residues
MTINIAIIAAIAYGMLAIIGGIIGYTKVGSKISLISGSISGLLLIISGIIQLMGINWGLTFSTIITTILIITFMIRLAKT
RKMMPGGLMIFTGIVAVAVMVYEISIKNSATT
>Mature_111_residues
TINIAIIAAIAYGMLAIIGGIIGYTKVGSKISLISGSISGLLLIISGIIQLMGINWGLTFSTIITTILIITFMIRLAKTR
KMMPGGLMIFTGIVAVAVMVYEISIKNSATT

Specific function: Unknown

COG id: COG5548

COG function: function code S; Small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11795; Mature: 11664

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTINIAIIAAIAYGMLAIIGGIIGYTKVGSKISLISGSISGLLLIISGIIQLMGINWGLT
CEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCCH
FSTIITTILIITFMIRLAKTRKMMPGGLMIFTGIVAVAVMVYEISIKNSATT
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TINIAIIAAIAYGMLAIIGGIIGYTKVGSKISLISGSISGLLLIISGIIQLMGINWGLT
EEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCCH
FSTIITTILIITFMIRLAKTRKMMPGGLMIFTGIVAVAVMVYEISIKNSATT
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA