Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477476

Identifier: 113477476

GI number: 113477476

Start: 6261144

End: 6261545

Strand: Reverse

Name: 113477476

Synonym: Tery_4052

Alternate gene names: NA

Gene position: 6261545-6261144 (Counterclockwise)

Preceding gene: 113477477

Following gene: 113477473

Centisome position: 80.79

GC content: 30.1

Gene sequence:

>402_bases
ATGAAAAAAGCAAACAATTTAGGAAATAAGTTTGGTGAATTTTTCAATACTGTTAAAAATGCAGGGGAAAAAATATCACA
AGCATTACAAGAAAATGTTGTTGATATTGATACTTTGAATAGTATCCAGAGGGAAACTTTAAATTTTGCTTTACTGGAGG
AAGATATTGAAAATATCCATACAAGAATTGAACAAGAAGGATATTCTGTGTTGGGAAGCCGTCTTATTCTTGATGACCAA
AAAGAATTGATAGAAATTAAAACTTACAGTAAAAAAGGAGAAAAAAGTTTTCTCAATACAACAAGTGCTACAGTCAAGAG
AGTGACAAATATTCCGACTGAGATTCTAGATGAAATAAAGACTAAAGGTAGCGCTGAAATAAGTGTTAAATTTGATGATT
GA

Upstream 100 bases:

>100_bases
AAAGCAAAGCTGGAGTTAGGCCGAAGAGGTACTTAAAGTAACAACTAAAGTTAATACAAAATGATTCAAAAAAACTTTAA
TTTTTTTCAGGAGGATATCT

Downstream 100 bases:

>100_bases
TTTGACTTTTATTTAAAATAAATTATGGTTAAATAATTGTTATTATAAACCTCAAGAAGCAATCTCACAGTAATAGAGAT
TGCCTCTTTCCACTCCGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKKANNLGNKFGEFFNTVKNAGEKISQALQENVVDIDTLNSIQRETLNFALLEEDIENIHTRIEQEGYSVLGSRLILDDQ
KELIEIKTYSKKGEKSFLNTTSATVKRVTNIPTEILDEIKTKGSAEISVKFDD

Sequences:

>Translated_133_residues
MKKANNLGNKFGEFFNTVKNAGEKISQALQENVVDIDTLNSIQRETLNFALLEEDIENIHTRIEQEGYSVLGSRLILDDQ
KELIEIKTYSKKGEKSFLNTTSATVKRVTNIPTEILDEIKTKGSAEISVKFDD
>Mature_133_residues
MKKANNLGNKFGEFFNTVKNAGEKISQALQENVVDIDTLNSIQRETLNFALLEEDIENIHTRIEQEGYSVLGSRLILDDQ
KELIEIKTYSKKGEKSFLNTTSATVKRVTNIPTEILDEIKTKGSAEISVKFDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15010; Mature: 15010

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKANNLGNKFGEFFNTVKNAGEKISQALQENVVDIDTLNSIQRETLNFALLEEDIENIH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TRIEQEGYSVLGSRLILDDQKELIEIKTYSKKGEKSFLNTTSATVKRVTNIPTEILDEIK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
TKGSAEISVKFDD
CCCCCEEEEEECC
>Mature Secondary Structure
MKKANNLGNKFGEFFNTVKNAGEKISQALQENVVDIDTLNSIQRETLNFALLEEDIENIH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TRIEQEGYSVLGSRLILDDQKELIEIKTYSKKGEKSFLNTTSATVKRVTNIPTEILDEIK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
TKGSAEISVKFDD
CCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA