| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477476
Identifier: 113477476
GI number: 113477476
Start: 6261144
End: 6261545
Strand: Reverse
Name: 113477476
Synonym: Tery_4052
Alternate gene names: NA
Gene position: 6261545-6261144 (Counterclockwise)
Preceding gene: 113477477
Following gene: 113477473
Centisome position: 80.79
GC content: 30.1
Gene sequence:
>402_bases ATGAAAAAAGCAAACAATTTAGGAAATAAGTTTGGTGAATTTTTCAATACTGTTAAAAATGCAGGGGAAAAAATATCACA AGCATTACAAGAAAATGTTGTTGATATTGATACTTTGAATAGTATCCAGAGGGAAACTTTAAATTTTGCTTTACTGGAGG AAGATATTGAAAATATCCATACAAGAATTGAACAAGAAGGATATTCTGTGTTGGGAAGCCGTCTTATTCTTGATGACCAA AAAGAATTGATAGAAATTAAAACTTACAGTAAAAAAGGAGAAAAAAGTTTTCTCAATACAACAAGTGCTACAGTCAAGAG AGTGACAAATATTCCGACTGAGATTCTAGATGAAATAAAGACTAAAGGTAGCGCTGAAATAAGTGTTAAATTTGATGATT GA
Upstream 100 bases:
>100_bases AAAGCAAAGCTGGAGTTAGGCCGAAGAGGTACTTAAAGTAACAACTAAAGTTAATACAAAATGATTCAAAAAAACTTTAA TTTTTTTCAGGAGGATATCT
Downstream 100 bases:
>100_bases TTTGACTTTTATTTAAAATAAATTATGGTTAAATAATTGTTATTATAAACCTCAAGAAGCAATCTCACAGTAATAGAGAT TGCCTCTTTCCACTCCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MKKANNLGNKFGEFFNTVKNAGEKISQALQENVVDIDTLNSIQRETLNFALLEEDIENIHTRIEQEGYSVLGSRLILDDQ KELIEIKTYSKKGEKSFLNTTSATVKRVTNIPTEILDEIKTKGSAEISVKFDD
Sequences:
>Translated_133_residues MKKANNLGNKFGEFFNTVKNAGEKISQALQENVVDIDTLNSIQRETLNFALLEEDIENIHTRIEQEGYSVLGSRLILDDQ KELIEIKTYSKKGEKSFLNTTSATVKRVTNIPTEILDEIKTKGSAEISVKFDD >Mature_133_residues MKKANNLGNKFGEFFNTVKNAGEKISQALQENVVDIDTLNSIQRETLNFALLEEDIENIHTRIEQEGYSVLGSRLILDDQ KELIEIKTYSKKGEKSFLNTTSATVKRVTNIPTEILDEIKTKGSAEISVKFDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15010; Mature: 15010
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKANNLGNKFGEFFNTVKNAGEKISQALQENVVDIDTLNSIQRETLNFALLEEDIENIH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TRIEQEGYSVLGSRLILDDQKELIEIKTYSKKGEKSFLNTTSATVKRVTNIPTEILDEIK HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH TKGSAEISVKFDD CCCCCEEEEEECC >Mature Secondary Structure MKKANNLGNKFGEFFNTVKNAGEKISQALQENVVDIDTLNSIQRETLNFALLEEDIENIH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TRIEQEGYSVLGSRLILDDQKELIEIKTYSKKGEKSFLNTTSATVKRVTNIPTEILDEIK HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH TKGSAEISVKFDD CCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA