Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113477419
Identifier: 113477419
GI number: 113477419
Start: 6158506
End: 6158751
Strand: Reverse
Name: 113477419
Synonym: Tery_3982
Alternate gene names: NA
Gene position: 6158751-6158506 (Counterclockwise)
Preceding gene: 113477420
Following gene: 113477417
Centisome position: 79.47
GC content: 39.43
Gene sequence:
>246_bases ATGCTCTGGATGGAATCTGCTGTAACTCTGAAACTTAAAGGGGTGACAAGAAAAGCGAAAATCTTTGAGCATCAGCAATT TATCGGAAAATTTGGGTTTATTGAAACTCATAAAATTGAGATTTTAACTTGGGAAGCTTTCAGGTTTCGCAGCAGCTTTT TTCCAGCAGGGCACAATAAGGACTCACAAAAATTTTTTGTAAGTCACGCTCGGGTTTCCGAGAGACTAAACAAACCTGGA AGCTAG
Upstream 100 bases:
>100_bases AATCAAAACTATAGCAAGTATTTAGATACATATACAGCAGATTCCAAGTATATAAAGTACAGATATTAACAATTAAATGT TTCTATTTTGGGCATCTTGA
Downstream 100 bases:
>100_bases CCTAACCGACTCCAGTTAACGCTATGAAGTTACGCGCAAGCTTCTAGGTTTAACCACTAGAGGGTTGTAAAGTATATGAA AAAAAAGTTTATTTGGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MLWMESAVTLKLKGVTRKAKIFEHQQFIGKFGFIETHKIEILTWEAFRFRSSFFPAGHNKDSQKFFVSHARVSERLNKPG S
Sequences:
>Translated_81_residues MLWMESAVTLKLKGVTRKAKIFEHQQFIGKFGFIETHKIEILTWEAFRFRSSFFPAGHNKDSQKFFVSHARVSERLNKPG S >Mature_81_residues MLWMESAVTLKLKGVTRKAKIFEHQQFIGKFGFIETHKIEILTWEAFRFRSSFFPAGHNKDSQKFFVSHARVSERLNKPG S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9487; Mature: 9487
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWMESAVTLKLKGVTRKAKIFEHQQFIGKFGFIETHKIEILTWEAFRFRSSFFPAGHNK CCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEECCEEEEEEEHHHHHHHHCCCCCCCC DSQKFFVSHARVSERLNKPGS CCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLWMESAVTLKLKGVTRKAKIFEHQQFIGKFGFIETHKIEILTWEAFRFRSSFFPAGHNK CCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEECCEEEEEEEHHHHHHHHCCCCCCCC DSQKFFVSHARVSERLNKPGS CCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA