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The map label for this gene is yfhF [C]

Identifier: 113477391

GI number: 113477391

Start: 6108569

End: 6108925

Strand: Reverse

Name: yfhF [C]

Synonym: Tery_3951

Alternate gene names: 113477391

Gene position: 6108925-6108569 (Counterclockwise)

Preceding gene: 113477395

Following gene: 113477390

Centisome position: 78.82

GC content: 38.94

Gene sequence:

>357_bases
ATGACAAAAACTACTCAGTCTCAACAAAAAGGAATTATGATGAGCGAAACTGCTGTAAAGCAGGTTCTATCCTTGAGAGA
TAAACAAGGAAAAGACCTTTGCCTACGAGTAGGGGTACGTCAAGGCGGATGTTCTGGAATGTCTTATATGATGGATTTTG
CCGACCCTAGCACAATTAGAGAGGATGATGAAGTTTTTGATTATGATGGATTTAAGGTGGTTTGCGATCGCAAGAGTATC
CTTTATCTTTATGGTTTGATGCTTGATTATAGTGATGCTTTAATTGGCGGTGGGTTCCAATTTACTAATCCTAATGCAAC
TCAAACCTGTGGTTGTGGTAATTCCTTTTCTGCTTAA

Upstream 100 bases:

>100_bases
AGTTAAAATTTCAGTTTTCAGGATAACATAAGAAGTAATATATCTAAGTAGTTACAAATTATTATTCGACAGCTATAACA
ATATAAGGAGCTAAAAACAA

Downstream 100 bases:

>100_bases
AATTAATTTCAAAAAAATCTAGTTTCTGAGAAGATCTAGGTTTTGTATTTTCTGTGTCTTCTGGAATTATATATAGGAGC
ATAGAAAAATCAATATTGGG

Product: iron-sulfur cluster assembly accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTKTTQSQQKGIMMSETAVKQVLSLRDKQGKDLCLRVGVRQGGCSGMSYMMDFADPSTIREDDEVFDYDGFKVVCDRKSI
LYLYGLMLDYSDALIGGGFQFTNPNATQTCGCGNSFSA

Sequences:

>Translated_118_residues
MTKTTQSQQKGIMMSETAVKQVLSLRDKQGKDLCLRVGVRQGGCSGMSYMMDFADPSTIREDDEVFDYDGFKVVCDRKSI
LYLYGLMLDYSDALIGGGFQFTNPNATQTCGCGNSFSA
>Mature_117_residues
TKTTQSQQKGIMMSETAVKQVLSLRDKQGKDLCLRVGVRQGGCSGMSYMMDFADPSTIREDDEVFDYDGFKVVCDRKSIL
YLYGLMLDYSDALIGGGFQFTNPNATQTCGCGNSFSA

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family. Ycf83 subfamily [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=112, Percent_Identity=33.0357142857143, Blast_Score=75, Evalue=1e-14,
Organism=Homo sapiens, GI160420328, Length=107, Percent_Identity=38.3177570093458, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788877, Length=107, Percent_Identity=43.9252336448598, Blast_Score=92, Evalue=9e-21,
Organism=Escherichia coli, GI1786351, Length=107, Percent_Identity=41.1214953271028, Blast_Score=74, Evalue=2e-15,
Organism=Escherichia coli, GI1787974, Length=107, Percent_Identity=31.7757009345794, Blast_Score=68, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25146411, Length=107, Percent_Identity=36.4485981308411, Blast_Score=75, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI193209025, Length=107, Percent_Identity=36.4485981308411, Blast_Score=75, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6323001, Length=106, Percent_Identity=36.7924528301887, Blast_Score=75, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24642263, Length=109, Percent_Identity=38.5321100917431, Blast_Score=79, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24649697, Length=120, Percent_Identity=35.8333333333333, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 12986; Mature: 12855

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTTQSQQKGIMMSETAVKQVLSLRDKQGKDLCLRVGVRQGGCSGMSYMMDFADPSTIR
CCCCCCCHHCCEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCC
EDDEVFDYDGFKVVCDRKSILYLYGLMLDYSDALIGGGFQFTNPNATQTCGCGNSFSA
CCCCEECCCCEEEEECCCHHHHHHHHHHHCCCCEECCCEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKTTQSQQKGIMMSETAVKQVLSLRDKQGKDLCLRVGVRQGGCSGMSYMMDFADPSTIR
CCCCCCHHCCEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCC
EDDEVFDYDGFKVVCDRKSILYLYGLMLDYSDALIGGGFQFTNPNATQTCGCGNSFSA
CCCCEECCCCEEEEECCCHHHHHHHHHHHCCCCEECCCEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]