Click here to switch to the map view.

The map label for this gene is 113477378

Identifier: 113477378

GI number: 113477378

Start: 6085669

End: 6086754

Strand: Reverse

Name: 113477378

Synonym: Tery_3935

Alternate gene names: NA

Gene position: 6086754-6085669 (Counterclockwise)

Preceding gene: 113477379

Following gene: 113477373

Centisome position: 78.54

GC content: 34.44

Gene sequence:

>1086_bases
ATGAGAAACAGTACAAAAAAGACCGTCAAAACTATTATTATAGCAGCTATTACCTCTATAATTATTTCCCCAACTTTTGC
TTTATTCAGACCTGTTATTGGGAAACAAAATATAGCGATCGCTCCCCAAAAAACTACAAGTGTTAGAAGTCCTGAAAGAA
ATTATATTGCCACAACTCCACAAATATCAACTGGAGCTATTGTACAACTAGAAGGTCTCAACTTACCACGGCCGAAAGTA
ACTGGAATTACCACTATTCCTCTCAAATTTTTAGACAGTGGAACAGCATTTACTTTAACAGCTACTTTAGGGAAAAAATC
CGGTGATTTTTTATTAGATACAGGAGCTTCTACTACAATGATTTCTACAAAAATAGTCAAAGAATTAGGATTAAAAGGAG
AACCTATACCAAAAGAACTTTTAACTTATGCAGTAGCTGGAGATGAGTGCCCCGAAATGAAAGCTAATTTGCATCGTTTA
CCTGTGTTAAAAATTGATGATGTTAAAGTCGAAAAATTAGCTGGTTTAGAGTTTACTACTACTATAATGCCAGGAGAATT
ATCAGGAGTTTTGGGGATGGATATTTTAAGTAATTTTGATGTAGAAATAAACCCTAAAACCCAAGAGTTACGGTTACTAT
CTCCCACGATCATACCCGCTAAAAATATTAAAGATGCTATCCCACTTAAATCTAAATTAGGAGTCATGTTAGCCGAGGTA
GAAATTAATGGCAACGGTCCGTTTATTTTTATGTTAGATACGGGAGCAGAAAGTATTTTTATTTCTCAGAAATTAGCTAG
TCAGTTAAAAATTACTGCTGCCGAAAGACAGGCAGTTCGAGTCCAGGGTTTTTGTGGCATTGAAATGGCAGAATTAGCTT
CCTTAGCTCAGGTGAAAATGGGAAATTATGAGTTGAGAAAATTAGAAACAGTAATTTTATCTTCCCCGGTATTAGAGTTA
TTAGAAGTTGATGGAATTTTAGGGCAAAACTTTTTTAATAATTATCAACAACATTGGCGCTTTGATCAAAAAAATGAAGA
ATTTCCTTCAGGAGGAAGTTTATTATTAAAACAGAGTAGGCAGTAG

Upstream 100 bases:

>100_bases
CTTTTTCAGATACCTACACCGCTTCATATTTTAAGTAATATTGTTATAGTATTTTATTAATGACTTAATTTTTTTTTTCT
GGAATATATTAGTAAGCTTT

Downstream 100 bases:

>100_bases
GTGGCAATTTTTACATACAAAACTTGTACTGAGTCAGGTTATTTTCATTTTTGACCCTGATCTAGTTTAGGTTAGGGTTC
TCAAAACTTTTTGCGGGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MRNSTKKTVKTIIIAAITSIIISPTFALFRPVIGKQNIAIAPQKTTSVRSPERNYIATTPQISTGAIVQLEGLNLPRPKV
TGITTIPLKFLDSGTAFTLTATLGKKSGDFLLDTGASTTMISTKIVKELGLKGEPIPKELLTYAVAGDECPEMKANLHRL
PVLKIDDVKVEKLAGLEFTTTIMPGELSGVLGMDILSNFDVEINPKTQELRLLSPTIIPAKNIKDAIPLKSKLGVMLAEV
EINGNGPFIFMLDTGAESIFISQKLASQLKITAAERQAVRVQGFCGIEMAELASLAQVKMGNYELRKLETVILSSPVLEL
LEVDGILGQNFFNNYQQHWRFDQKNEEFPSGGSLLLKQSRQ

Sequences:

>Translated_361_residues
MRNSTKKTVKTIIIAAITSIIISPTFALFRPVIGKQNIAIAPQKTTSVRSPERNYIATTPQISTGAIVQLEGLNLPRPKV
TGITTIPLKFLDSGTAFTLTATLGKKSGDFLLDTGASTTMISTKIVKELGLKGEPIPKELLTYAVAGDECPEMKANLHRL
PVLKIDDVKVEKLAGLEFTTTIMPGELSGVLGMDILSNFDVEINPKTQELRLLSPTIIPAKNIKDAIPLKSKLGVMLAEV
EINGNGPFIFMLDTGAESIFISQKLASQLKITAAERQAVRVQGFCGIEMAELASLAQVKMGNYELRKLETVILSSPVLEL
LEVDGILGQNFFNNYQQHWRFDQKNEEFPSGGSLLLKQSRQ
>Mature_361_residues
MRNSTKKTVKTIIIAAITSIIISPTFALFRPVIGKQNIAIAPQKTTSVRSPERNYIATTPQISTGAIVQLEGLNLPRPKV
TGITTIPLKFLDSGTAFTLTATLGKKSGDFLLDTGASTTMISTKIVKELGLKGEPIPKELLTYAVAGDECPEMKANLHRL
PVLKIDDVKVEKLAGLEFTTTIMPGELSGVLGMDILSNFDVEINPKTQELRLLSPTIIPAKNIKDAIPLKSKLGVMLAEV
EINGNGPFIFMLDTGAESIFISQKLASQLKITAAERQAVRVQGFCGIEMAELASLAQVKMGNYELRKLETVILSSPVLEL
LEVDGILGQNFFNNYQQHWRFDQKNEEFPSGGSLLLKQSRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39366; Mature: 39366

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNSTKKTVKTIIIAAITSIIISPTFALFRPVIGKQNIAIAPQKTTSVRSPERNYIATTP
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEECC
QISTGAIVQLEGLNLPRPKVTGITTIPLKFLDSGTAFTLTATLGKKSGDFLLDTGASTTM
CCCCCCEEEEECCCCCCCCCCCEEEEEHEEECCCCEEEEEEECCCCCCCEEEECCCCCHH
ISTKIVKELGLKGEPIPKELLTYAVAGDECPEMKANLHRLPVLKIDDVKVEKLAGLEFTT
HHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCCHHHHCCCEEEE
TIMPGELSGVLGMDILSNFDVEINPKTQELRLLSPTIIPAKNIKDAIPLKSKLGVMLAEV
EECCCCCCCHHHHHHHCCCCEEECCCHHEEEEECCCCCCCCCCCHHCCCHHHCCEEEEEE
EINGNGPFIFMLDTGAESIFISQKLASQLKITAAERQAVRVQGFCGIEMAELASLAQVKM
EECCCCCEEEEECCCCCEEEEHHHHHHHHEEEEHHCCEEEEECCCCCCHHHHHHHHHHHC
GNYELRKLETVILSSPVLELLEVDGILGQNFFNNYQQHWRFDQKNEEFPSGGSLLLKQSR
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCC
Q
C
>Mature Secondary Structure
MRNSTKKTVKTIIIAAITSIIISPTFALFRPVIGKQNIAIAPQKTTSVRSPERNYIATTP
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEECC
QISTGAIVQLEGLNLPRPKVTGITTIPLKFLDSGTAFTLTATLGKKSGDFLLDTGASTTM
CCCCCCEEEEECCCCCCCCCCCEEEEEHEEECCCCEEEEEEECCCCCCCEEEECCCCCHH
ISTKIVKELGLKGEPIPKELLTYAVAGDECPEMKANLHRLPVLKIDDVKVEKLAGLEFTT
HHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCCHHHHCCCEEEE
TIMPGELSGVLGMDILSNFDVEINPKTQELRLLSPTIIPAKNIKDAIPLKSKLGVMLAEV
EECCCCCCCHHHHHHHCCCCEEECCCHHEEEEECCCCCCCCCCCHHCCCHHHCCEEEEEE
EINGNGPFIFMLDTGAESIFISQKLASQLKITAAERQAVRVQGFCGIEMAELASLAQVKM
EECCCCCEEEEECCCCCEEEEHHHHHHHHEEEEHHCCEEEEECCCCCCHHHHHHHHHHHC
GNYELRKLETVILSSPVLELLEVDGILGQNFFNNYQQHWRFDQKNEEFPSGGSLLLKQSR
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA