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The map label for this gene is 113477359

Identifier: 113477359

GI number: 113477359

Start: 6049362

End: 6049724

Strand: Reverse

Name: 113477359

Synonym: Tery_3915

Alternate gene names: NA

Gene position: 6049724-6049362 (Counterclockwise)

Preceding gene: 113477360

Following gene: 113477358

Centisome position: 78.06

GC content: 36.36

Gene sequence:

>363_bases
ATGACTTCTTTTGAGGAAATTTATCAATTTTTCCAAAGTCCCCCTCCATTCTATCTAAATAAAGAACTAGCAGTATGCTA
TGTCCTATTTATACTATTGCAAAGAGACTCTTATGGAACCGAATTGATTGGCCAAGTAAAAAGAGACTATCCTATTTATC
GACTTTCCGATACTGTGTTGTATAGTGCTCTAAAATTTCTGGAAGACCAAGGTATAGTTATTGGCTATTGGAAAAAAGTG
GGAGGAAGAGGACGTCCACGGAAAATGTATCAACTTATTCCTCAGTGGCGACCCCAAGCTATAAATTTAGCAAGACTTTG
GTCTGAATATACTAATCATCCTCATATTCGGCCTCAAATTTAA

Upstream 100 bases:

>100_bases
TAACATTTACTTGACATAATAATAACTATAGTTTTTCAAAAAAACCAAAAAGTCGTCCAAGAAGGACGAGGCTTTTAACC
CAATTTTTTGGTAAATTCAG

Downstream 100 bases:

>100_bases
CCACCCATTTTGTAAAAAAAGCTGATGATAATAATATCAAGTGAGAGCAATTTTACTGCTGATTTTGGGAAAAAAATTAA
AGCTTTAATTTTTTTGTACC

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: Circadian Period Extender Pex; Period-Extender Protein; PadR Family Transcriptional Regulator; Circadian Period Extender Gene; Period-Extender; Transcriptional Regulator PadR Family; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; Transcriptional Regulator PadR Family Protein; Circadian Period Extender

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTSFEEIYQFFQSPPPFYLNKELAVCYVLFILLQRDSYGTELIGQVKRDYPIYRLSDTVLYSALKFLEDQGIVIGYWKKV
GGRGRPRKMYQLIPQWRPQAINLARLWSEYTNHPHIRPQI

Sequences:

>Translated_120_residues
MTSFEEIYQFFQSPPPFYLNKELAVCYVLFILLQRDSYGTELIGQVKRDYPIYRLSDTVLYSALKFLEDQGIVIGYWKKV
GGRGRPRKMYQLIPQWRPQAINLARLWSEYTNHPHIRPQI
>Mature_119_residues
TSFEEIYQFFQSPPPFYLNKELAVCYVLFILLQRDSYGTELIGQVKRDYPIYRLSDTVLYSALKFLEDQGIVIGYWKKVG
GRGRPRKMYQLIPQWRPQAINLARLWSEYTNHPHIRPQI

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14319; Mature: 14188

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSFEEIYQFFQSPPPFYLNKELAVCYVLFILLQRDSYGTELIGQVKRDYPIYRLSDTVL
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEHHHHHH
YSALKFLEDQGIVIGYWKKVGGRGRPRKMYQLIPQWRPQAINLARLWSEYTNHPHIRPQI
HHHHHHHHCCCEEEEEHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TSFEEIYQFFQSPPPFYLNKELAVCYVLFILLQRDSYGTELIGQVKRDYPIYRLSDTVL
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEHHHHHH
YSALKFLEDQGIVIGYWKKVGGRGRPRKMYQLIPQWRPQAINLARLWSEYTNHPHIRPQI
HHHHHHHHCCCEEEEEHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA