Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477347

Identifier: 113477347

GI number: 113477347

Start: 6026445

End: 6026660

Strand: Reverse

Name: 113477347

Synonym: Tery_3900

Alternate gene names: NA

Gene position: 6026660-6026445 (Counterclockwise)

Preceding gene: 113477355

Following gene: 113477345

Centisome position: 77.76

GC content: 33.33

Gene sequence:

>216_bases
ATGGAAAGACTTAACTCAGCTAGATTAGTTGTAAACTATAGAGAAATAAGAGCTATATCTAGTCAACCAGAACAAGAGTA
TATTGAAGGAGTAGGATACATAATAGGAGACCTAACTTGTAAATTTAATGCTAGGTCTTCTTATATTCGTTGTGCAGTTA
ACCCTATTGGACCATGTAAAGGTTGTGGTCATTATCAGTCAATAGATATTGATTAG

Upstream 100 bases:

>100_bases
ACTCAGAATAAATGTGTTTGGAATATTACTAATTTTTTTGATAAGCATAACTCCTTGCTTATTTTATGCATGGACTTTCC
ATAAGCTGGAAGCAAGGACT

Downstream 100 bases:

>100_bases
TTTAAGTGATTTATAGGAATTTCTATCTCTGGTAATGAGTGAGATACAAAGTTCCTTGGTTTTAGGAAGTAGGGAGCAAT
AATTTGCATTTGGTAGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MERLNSARLVVNYREIRAISSQPEQEYIEGVGYIIGDLTCKFNARSSYIRCAVNPIGPCKGCGHYQSIDID

Sequences:

>Translated_71_residues
MERLNSARLVVNYREIRAISSQPEQEYIEGVGYIIGDLTCKFNARSSYIRCAVNPIGPCKGCGHYQSIDID
>Mature_71_residues
MERLNSARLVVNYREIRAISSQPEQEYIEGVGYIIGDLTCKFNARSSYIRCAVNPIGPCKGCGHYQSIDID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7983; Mature: 7983

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLNSARLVVNYREIRAISSQPEQEYIEGVGYIIGDLTCKFNARSSYIRCAVNPIGPCK
CCCCCCCEEEEEHHHHHCCCCCCHHHHHHHHCEEEEEEEEEECCCCCEEEEECCCCCCCC
GCGHYQSIDID
CCCCCEEECCC
>Mature Secondary Structure
MERLNSARLVVNYREIRAISSQPEQEYIEGVGYIIGDLTCKFNARSSYIRCAVNPIGPCK
CCCCCCCEEEEEHHHHHCCCCCCHHHHHHHHCEEEEEEEEEECCCCCEEEEECCCCCCCC
GCGHYQSIDID
CCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA