| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477347
Identifier: 113477347
GI number: 113477347
Start: 6026445
End: 6026660
Strand: Reverse
Name: 113477347
Synonym: Tery_3900
Alternate gene names: NA
Gene position: 6026660-6026445 (Counterclockwise)
Preceding gene: 113477355
Following gene: 113477345
Centisome position: 77.76
GC content: 33.33
Gene sequence:
>216_bases ATGGAAAGACTTAACTCAGCTAGATTAGTTGTAAACTATAGAGAAATAAGAGCTATATCTAGTCAACCAGAACAAGAGTA TATTGAAGGAGTAGGATACATAATAGGAGACCTAACTTGTAAATTTAATGCTAGGTCTTCTTATATTCGTTGTGCAGTTA ACCCTATTGGACCATGTAAAGGTTGTGGTCATTATCAGTCAATAGATATTGATTAG
Upstream 100 bases:
>100_bases ACTCAGAATAAATGTGTTTGGAATATTACTAATTTTTTTGATAAGCATAACTCCTTGCTTATTTTATGCATGGACTTTCC ATAAGCTGGAAGCAAGGACT
Downstream 100 bases:
>100_bases TTTAAGTGATTTATAGGAATTTCTATCTCTGGTAATGAGTGAGATACAAAGTTCCTTGGTTTTAGGAAGTAGGGAGCAAT AATTTGCATTTGGTAGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MERLNSARLVVNYREIRAISSQPEQEYIEGVGYIIGDLTCKFNARSSYIRCAVNPIGPCKGCGHYQSIDID
Sequences:
>Translated_71_residues MERLNSARLVVNYREIRAISSQPEQEYIEGVGYIIGDLTCKFNARSSYIRCAVNPIGPCKGCGHYQSIDID >Mature_71_residues MERLNSARLVVNYREIRAISSQPEQEYIEGVGYIIGDLTCKFNARSSYIRCAVNPIGPCKGCGHYQSIDID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7983; Mature: 7983
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLNSARLVVNYREIRAISSQPEQEYIEGVGYIIGDLTCKFNARSSYIRCAVNPIGPCK CCCCCCCEEEEEHHHHHCCCCCCHHHHHHHHCEEEEEEEEEECCCCCEEEEECCCCCCCC GCGHYQSIDID CCCCCEEECCC >Mature Secondary Structure MERLNSARLVVNYREIRAISSQPEQEYIEGVGYIIGDLTCKFNARSSYIRCAVNPIGPCK CCCCCCCEEEEEHHHHHCCCCCCHHHHHHHHCEEEEEEEEEECCCCCEEEEECCCCCCCC GCGHYQSIDID CCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA