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The map label for this gene is ubiA

Identifier: 113477330

GI number: 113477330

Start: 6002976

End: 6004025

Strand: Reverse

Name: ubiA

Synonym: Tery_3881

Alternate gene names: NA

Gene position: 6004025-6002976 (Counterclockwise)

Preceding gene: 113477331

Following gene: 113477329

Centisome position: 77.47

GC content: 35.05

Gene sequence:

>1050_bases
ATGGGAAAAATTGCTGGTTCTCAACAGGGAAAAATTACAACGAATTGGCTACAAAAATATGTGCCATGGCTTTATAGTTT
TTGGAAGTTTGCTCGCCCACATACGATTATTGGTACATCGTTAAGTGTGCTGGCTTTATATATAATTGCCATGGGCGATC
GCTCTAATTTTTTTGACAAATATTTTTTTTTATACAGCTTAATTCTGTTATTGATAACTTGGATTAGTTGTTTATGTGGA
AATATTTATATAGTAGGATTAAATCAATTAGAGGATATAGAAATAGATAGGATTAATAAGCCTCATCTCCCTATAGCTGC
TGGTGAGTTTTCTCGTTTTTCTGGTCAAATAATTGTGGTAATAACGGGTATTTTGGCTTTGAGTTTTGCCGGGTTGGGGG
GACCTTTTTTGTTGGGTACAGTGGGGATAAGTTTGGCAATTGGTACGGCTTATTCTTTACCTCCTATTCGATTAAAAAGA
TTTCCTGTTTTGGCCGCATTATGTATTTTTACTGTGCGGGGAGTTATTGTTAATTTGGGTATATTTTTAAGCTTTGTTTG
GGGGTTTGAAAAGGTTGAGGAGGTTTCAGGAGGTTTAATTAAATGGATGGGTGAGTTGGGTGAGGTTGTTCTACTTCAAA
AAAGCTTGATGGTTCCAGAAATTCCTCTGACGGTATGGGCTTTAACTTTGTTTGTGATAGTATTTACTTTTGCTATTGCT
ATTTTTAAGGATATTCCAGATATTGAGGGTGACCGTCAATATAATATTAATACGTTTACGATTAAGTTGGGAGCATTTGC
TGTTTTTAATTTGGCAAGGTGGGTATTGACTTTTTGCTATCTGGGTATGGTGATGGTGGGTGTAGTTTGGTTGGCGAGTG
TTAATTTATTTTTTTTGGTGATTAGTCATTTATTGGCTTTGGGTATAATGTGGTGGTTTAGTCAAAGGGTAGATCTGCAT
GATAAAAAGGCGATCGCTGATTTTTATCAATTTATTTGGAAATTATTTTTCCTGGAATATCTAATTTTTCCTATGGCTTG
TTTTTTTTAA

Upstream 100 bases:

>100_bases
TAAAAAGGGTGATTTCTGCTAAGAAATTTAGTGAGTTTTTTAATGTCTTTTCTCTTGGTTTCACTAAGAACTTTAAATTT
AAATAATTTCACAGGTAATT

Downstream 100 bases:

>100_bases
GTTGGAAGTCAAAAGTCAGAAGGTTGATAATTTTGTCTGATTTTTAATGACTAGACTAGATAGGTCCGGGATATCCAGCA
CTGCCACATCAAAACTGTTT

Product: tocopherol phytyltransferase

Products: NA

Alternate protein names: UbiA Prenyltransferase; Prenyltransferase UbiA Family

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MGKIAGSQQGKITTNWLQKYVPWLYSFWKFARPHTIIGTSLSVLALYIIAMGDRSNFFDKYFFLYSLILLLITWISCLCG
NIYIVGLNQLEDIEIDRINKPHLPIAAGEFSRFSGQIIVVITGILALSFAGLGGPFLLGTVGISLAIGTAYSLPPIRLKR
FPVLAALCIFTVRGVIVNLGIFLSFVWGFEKVEEVSGGLIKWMGELGEVVLLQKSLMVPEIPLTVWALTLFVIVFTFAIA
IFKDIPDIEGDRQYNINTFTIKLGAFAVFNLARWVLTFCYLGMVMVGVVWLASVNLFFLVISHLLALGIMWWFSQRVDLH
DKKAIADFYQFIWKLFFLEYLIFPMACFF

Sequences:

>Translated_349_residues
MGKIAGSQQGKITTNWLQKYVPWLYSFWKFARPHTIIGTSLSVLALYIIAMGDRSNFFDKYFFLYSLILLLITWISCLCG
NIYIVGLNQLEDIEIDRINKPHLPIAAGEFSRFSGQIIVVITGILALSFAGLGGPFLLGTVGISLAIGTAYSLPPIRLKR
FPVLAALCIFTVRGVIVNLGIFLSFVWGFEKVEEVSGGLIKWMGELGEVVLLQKSLMVPEIPLTVWALTLFVIVFTFAIA
IFKDIPDIEGDRQYNINTFTIKLGAFAVFNLARWVLTFCYLGMVMVGVVWLASVNLFFLVISHLLALGIMWWFSQRVDLH
DKKAIADFYQFIWKLFFLEYLIFPMACFF
>Mature_348_residues
GKIAGSQQGKITTNWLQKYVPWLYSFWKFARPHTIIGTSLSVLALYIIAMGDRSNFFDKYFFLYSLILLLITWISCLCGN
IYIVGLNQLEDIEIDRINKPHLPIAAGEFSRFSGQIIVVITGILALSFAGLGGPFLLGTVGISLAIGTAYSLPPIRLKRF
PVLAALCIFTVRGVIVNLGIFLSFVWGFEKVEEVSGGLIKWMGELGEVVLLQKSLMVPEIPLTVWALTLFVIVFTFAIAI
FKDIPDIEGDRQYNINTFTIKLGAFAVFNLARWVLTFCYLGMVMVGVVWLASVNLFFLVISHLLALGIMWWFSQRVDLHD
KKAIADFYQFIWKLFFLEYLIFPMACFF

Specific function: Unknown

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39471; Mature: 39340

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKIAGSQQGKITTNWLQKYVPWLYSFWKFARPHTIIGTSLSVLALYIIAMGDRSNFFDK
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHCCCCCHHHHH
YFFLYSLILLLITWISCLCGNIYIVGLNQLEDIEIDRINKPHLPIAAGEFSRFSGQIIVV
HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEECCCHHHHCCCHHHH
ITGILALSFAGLGGPFLLGTVGISLAIGTAYSLPPIRLKRFPVLAALCIFTVRGVIVNLG
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IFLSFVWGFEKVEEVSGGLIKWMGELGEVVLLQKSLMVPEIPLTVWALTLFVIVFTFAIA
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
IFKDIPDIEGDRQYNINTFTIKLGAFAVFNLARWVLTFCYLGMVMVGVVWLASVNLFFLV
HHHHCCCCCCCCEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISHLLALGIMWWFSQRVDLHDKKAIADFYQFIWKLFFLEYLIFPMACFF
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKIAGSQQGKITTNWLQKYVPWLYSFWKFARPHTIIGTSLSVLALYIIAMGDRSNFFDK
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHCCCCCHHHHH
YFFLYSLILLLITWISCLCGNIYIVGLNQLEDIEIDRINKPHLPIAAGEFSRFSGQIIVV
HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEECCCHHHHCCCHHHH
ITGILALSFAGLGGPFLLGTVGISLAIGTAYSLPPIRLKRFPVLAALCIFTVRGVIVNLG
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IFLSFVWGFEKVEEVSGGLIKWMGELGEVVLLQKSLMVPEIPLTVWALTLFVIVFTFAIA
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
IFKDIPDIEGDRQYNINTFTIKLGAFAVFNLARWVLTFCYLGMVMVGVVWLASVNLFFLV
HHHHCCCCCCCCEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISHLLALGIMWWFSQRVDLHDKKAIADFYQFIWKLFFLEYLIFPMACFF
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA