| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477323
Identifier: 113477323
GI number: 113477323
Start: 5989590
End: 5990066
Strand: Reverse
Name: 113477323
Synonym: Tery_3873
Alternate gene names: NA
Gene position: 5990066-5989590 (Counterclockwise)
Preceding gene: 113477328
Following gene: 113477320
Centisome position: 77.29
GC content: 31.03
Gene sequence:
>477_bases ATGACAGAAATAGTATTGCCAAATTCCTGTAATTTAAGACTTGCATCTGCTAAGGATATCTGGTCTATCCGTAAGTTAGT TTTCACTGCTAAACTTGACCCGACTCAATTACGTTGGGAACAATTTTTGCTAATTGAATGTGAGGGAAAATTAGTAGCTT GTGGACAGTTGCGTAATTTTGAGGATGCACAAGAATTAGGTAGTTTAGTAGTTGTAAAATCTTGGCAAAAATGTGGGCTA GGTACAACACTTGCAAAATATCTGATTGAACAAGCAACTAAACCTTTATATCTGGAATGTTTAGGTAAAAAATTAGAATC TTTTTACAGTCGTTTAGATTTTGTTCCTATTTCTTTAGCCGAATCACCTAAATCTTTAAAGTTTAAATTTGGCATCTCTC AATTAGGCAGAAAAATATTCAAAATTCCTATGATAATTATGGAATATAAAGGAAATAAATTAATTAATTATAATTAG
Upstream 100 bases:
>100_bases TTATTTCTGAACTTTTTAGATTATATAATCTTTCTTATAAAGTAGAGCAAATAACTATATTCATTATAATGAAGATATCT AAGATTTTTATTTGTTGAAA
Downstream 100 bases:
>100_bases GTATTACTCAAAAATTTTGTTGGTAAGGAAAGTGAATATGGTAAAAATTTAGCTGAATAATTACGTTTATAATATTAATT TATCTGCATTTTTGCTGCTT
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase GNAT Family; Acetyltransferase; GCN5-Like N-Acetyltransferase
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTEIVLPNSCNLRLASAKDIWSIRKLVFTAKLDPTQLRWEQFLLIECEGKLVACGQLRNFEDAQELGSLVVVKSWQKCGL GTTLAKYLIEQATKPLYLECLGKKLESFYSRLDFVPISLAESPKSLKFKFGISQLGRKIFKIPMIIMEYKGNKLINYN
Sequences:
>Translated_158_residues MTEIVLPNSCNLRLASAKDIWSIRKLVFTAKLDPTQLRWEQFLLIECEGKLVACGQLRNFEDAQELGSLVVVKSWQKCGL GTTLAKYLIEQATKPLYLECLGKKLESFYSRLDFVPISLAESPKSLKFKFGISQLGRKIFKIPMIIMEYKGNKLINYN >Mature_157_residues TEIVLPNSCNLRLASAKDIWSIRKLVFTAKLDPTQLRWEQFLLIECEGKLVACGQLRNFEDAQELGSLVVVKSWQKCGLG TTLAKYLIEQATKPLYLECLGKKLESFYSRLDFVPISLAESPKSLKFKFGISQLGRKIFKIPMIIMEYKGNKLINYN
Specific function: Unknown
COG id: COG1246
COG function: function code E; N-acetylglutamate synthase and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18055; Mature: 17923
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEIVLPNSCNLRLASAKDIWSIRKLVFTAKLDPTQLRWEQFLLIECEGKLVACGQLRNF CCEEECCCCCCEEEECHHHHHHHHHHHHHCCCCHHHHHHEEEEEEEECCCEEEECCCCCC EDAQELGSLVVVKSWQKCGLGTTLAKYLIEQATKPLYLECLGKKLESFYSRLDFVPISLA CCHHHHCCEEEEECHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECC ESPKSLKFKFGISQLGRKIFKIPMIIMEYKGNKLINYN CCCCCEEEEECHHHHHHHHHHCCEEEEEECCCEEECCC >Mature Secondary Structure TEIVLPNSCNLRLASAKDIWSIRKLVFTAKLDPTQLRWEQFLLIECEGKLVACGQLRNF CEEECCCCCCEEEECHHHHHHHHHHHHHCCCCHHHHHHEEEEEEEECCCEEEECCCCCC EDAQELGSLVVVKSWQKCGLGTTLAKYLIEQATKPLYLECLGKKLESFYSRLDFVPISLA CCHHHHCCEEEEECHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECC ESPKSLKFKFGISQLGRKIFKIPMIIMEYKGNKLINYN CCCCCEEEEECHHHHHHHHHHCCEEEEEECCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA