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The map label for this gene is glyQ

Identifier: 113477317

GI number: 113477317

Start: 5978061

End: 5978945

Strand: Reverse

Name: glyQ

Synonym: Tery_3866

Alternate gene names: 113477317

Gene position: 5978945-5978061 (Counterclockwise)

Preceding gene: 113477319

Following gene: 113477316

Centisome position: 77.15

GC content: 43.73

Gene sequence:

>885_bases
GTGAACTTCCAATCAGTCATAGCCACCTTAAATCAATTCTGGAGCGATCGCGGCTGTCTAATCGCTCAATCTTATGATAC
CGAAAAAGGAGCAGGTACAATGAACCCCCACACCTTTCTGCGGGCGATCGGTCCTGAACCTTGGTCAGTAGCCTATGTTG
AACCCTGTCGGCGTCCCACAGATGGGCGTTATGGAGAAAACCCCAACCGCTTTCAACACTACTATCAATATCAAGTCTTA
ATGAAACCCTCCCCCAATAACATTCAAGACCTTTACCTAGACTCTCTCCGTGCTCTAGGTATCCGTCCAGAAGATCATGA
TATTCGATTTGTAGAAGACAACTGGGAGTCCCCCACCCTAGGAGCTTGGGGTGTTGGTTGGGAAGTATGGCTTGATGGCA
TGGAAATCACCCAATTTACTTACTTTCAACAATGTGGTAGCATTGACTGTCGGCCAGTTTCCATCGAAATCACCTATGGT
TTAGAACGCCTTGCCATGTATCTCCAGGAAGTTGATGCTATCACTAAAATAGCATGGACTGACAACATCACTTATGGAGA
CGTTTACCTTCAGGGAGAAATTGAACAATGTAGCTATAACTTTGAAGCATCTAGCCCTGATTTTTTGTTTAACTTATTTG
GTCTTTATGAACAAGAAGCCAAACAACTCATAAAACGAGAATTAGTCTTACCAAGTTTAGACTATGTTCTCAAATGTTCC
CACAGTTTTAACTTACTTGATGCCAGAGGAGTAATTTCCGTCACCGAACGCACCCGTTATATTGGCCGAATTCGTAATTT
AGCGCGGCAAGTAGGTCAACTTTACTTGCAACAACGGGAAAAGCTTAACTTTCCACTGCTCAAAGAAACCATGGAAGCAG
CCTAA

Upstream 100 bases:

>100_bases
TATGTTATATAATAAATGGGAAAAAATAACAGAGTATTTTGCTCTAAAAAATCCCAAAAATGCCCTAACATTAGGTAAAC
TCAAGAGCTAAAAAAATTAA

Downstream 100 bases:

>100_bases
ACTTACTGAAAAAAAAACAGAAACCAGGTTGCTCCAGGAAAATTCCTGAGAGCCAACAAATAATCAGATCAATAAACCCG
GTTTATTATTTAGATAGGTA

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MNFQSVIATLNQFWSDRGCLIAQSYDTEKGAGTMNPHTFLRAIGPEPWSVAYVEPCRRPTDGRYGENPNRFQHYYQYQVL
MKPSPNNIQDLYLDSLRALGIRPEDHDIRFVEDNWESPTLGAWGVGWEVWLDGMEITQFTYFQQCGSIDCRPVSIEITYG
LERLAMYLQEVDAITKIAWTDNITYGDVYLQGEIEQCSYNFEASSPDFLFNLFGLYEQEAKQLIKRELVLPSLDYVLKCS
HSFNLLDARGVISVTERTRYIGRIRNLARQVGQLYLQQREKLNFPLLKETMEAA

Sequences:

>Translated_294_residues
MNFQSVIATLNQFWSDRGCLIAQSYDTEKGAGTMNPHTFLRAIGPEPWSVAYVEPCRRPTDGRYGENPNRFQHYYQYQVL
MKPSPNNIQDLYLDSLRALGIRPEDHDIRFVEDNWESPTLGAWGVGWEVWLDGMEITQFTYFQQCGSIDCRPVSIEITYG
LERLAMYLQEVDAITKIAWTDNITYGDVYLQGEIEQCSYNFEASSPDFLFNLFGLYEQEAKQLIKRELVLPSLDYVLKCS
HSFNLLDARGVISVTERTRYIGRIRNLARQVGQLYLQQREKLNFPLLKETMEAA
>Mature_294_residues
MNFQSVIATLNQFWSDRGCLIAQSYDTEKGAGTMNPHTFLRAIGPEPWSVAYVEPCRRPTDGRYGENPNRFQHYYQYQVL
MKPSPNNIQDLYLDSLRALGIRPEDHDIRFVEDNWESPTLGAWGVGWEVWLDGMEITQFTYFQQCGSIDCRPVSIEITYG
LERLAMYLQEVDAITKIAWTDNITYGDVYLQGEIEQCSYNFEASSPDFLFNLFGLYEQEAKQLIKRELVLPSLDYVLKCS
HSFNLLDARGVISVTERTRYIGRIRNLARQVGQLYLQQREKLNFPLLKETMEAA

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Escherichia coli, GI1789983, Length=291, Percent_Identity=61.5120274914089, Blast_Score=381, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYGA_TRIEI (Q10XW9)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_723378.1
- ProteinModelPortal:   Q10XW9
- SMR:   Q10XW9
- STRING:   Q10XW9
- GeneID:   4243529
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_3866
- NMPDR:   fig|203124.1.peg.4983
- eggNOG:   COG0752
- HOGENOM:   HBG285316
- OMA:   CRRPTDG
- PhylomeDB:   Q10XW9
- ProtClustDB:   PRK09348
- BioCyc:   TERY203124:TERY_3866-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00254
- InterPro:   IPR006194
- InterPro:   IPR002310
- PRINTS:   PR01044
- TIGRFAMs:   TIGR00388

Pfam domain/function: PF02091 tRNA-synt_2e

EC number: =6.1.1.14

Molecular weight: Translated: 34080; Mature: 34080

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFQSVIATLNQFWSDRGCLIAQSYDTEKGAGTMNPHTFLRAIGPEPWSVAYVEPCRRPT
CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCC
DGRYGENPNRFQHYYQYQVLMKPSPNNIQDLYLDSLRALGIRPEDHDIRFVEDNWESPTL
CCCCCCCCHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
GAWGVGWEVWLDGMEITQFTYFQQCGSIDCRPVSIEITYGLERLAMYLQEVDAITKIAWT
CCCCCCHHHEECCCHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHEEEC
DNITYGDVYLQGEIEQCSYNFEASSPDFLFNLFGLYEQEAKQLIKRELVLPSLDYVLKCS
CCCEECEEEEEEEHHHCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECC
HSFNLLDARGVISVTERTRYIGRIRNLARQVGQLYLQQREKLNFPLLKETMEAA
CCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
>Mature Secondary Structure
MNFQSVIATLNQFWSDRGCLIAQSYDTEKGAGTMNPHTFLRAIGPEPWSVAYVEPCRRPT
CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCC
DGRYGENPNRFQHYYQYQVLMKPSPNNIQDLYLDSLRALGIRPEDHDIRFVEDNWESPTL
CCCCCCCCHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
GAWGVGWEVWLDGMEITQFTYFQQCGSIDCRPVSIEITYGLERLAMYLQEVDAITKIAWT
CCCCCCHHHEECCCHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHEEEC
DNITYGDVYLQGEIEQCSYNFEASSPDFLFNLFGLYEQEAKQLIKRELVLPSLDYVLKCS
CCCEECEEEEEEEHHHCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECC
HSFNLLDARGVISVTERTRYIGRIRNLARQVGQLYLQQREKLNFPLLKETMEAA
CCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA