| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477256
Identifier: 113477256
GI number: 113477256
Start: 5839992
End: 5841062
Strand: Reverse
Name: 113477256
Synonym: Tery_3799
Alternate gene names: NA
Gene position: 5841062-5839992 (Counterclockwise)
Preceding gene: 113477257
Following gene: 113477253
Centisome position: 75.37
GC content: 33.15
Gene sequence:
>1071_bases ATGGGTTTTTTTGATTTTGAAGTAGGGCAAATTTTACAGTTTTTACAGCAGGGTAATTCTCTGGAGAAAAAAGAATTAGA AATTTTAGCAAGTCAGGAATTAATAGATAAAAAACGTGCTCATGTTTTTAATATTACTTCGGCTAATGTGAGGGAAGTAA TTATGGAGCGATCGCTTCTATTTCAGTCTGTAATTTCTGACTATGATAAGTTTCCTCTCAGAGACTATAATACTTTAGCA ATTTTATGGAAATTATGGTTACCTTTAGGAATAAAGTTAGCTAGTAAATGTCAAGGTTTAAGTCGCCCATTCATTCAAGG AATTTTAGGGGGGCAAGGAACTGGTAAGACTACTCTGGCAAAAATTTTAGTGTTAGTTTTAGATAAGCTTGGATATAAAA CTATTAGCTTTTCTATTGATGATATTTATAAAACTTACGCTGAACGTCAACTTTTACAAAGGCAAGATTCGAGATTAATT TGGCGCGGTCCTCCTGGCACCCATGATGTTAGTTTAGGAATTGAAGTTTTGGATAAGTTACGTCAATCTAAAAGTGAAAA TTCTGATGGTTTAATTGCTATTCCTAGATTTAATAAGTCTCTTTTTAATGGTGCTGGAGATCGAGTTGAACCGGAAATAG TAAGTAAGGTTGATATTATTTTATTTGAGGGTTGGTTTGTGGGAGTTCGACCCGTTGAGGATAAAGTTTTTGATATGGCA AAACTACTACCAATTATTACAGAGGCAGACCGAAAGTTTGCCCGTGATATGAATAAAAATTTGATGCAATATTTACCTCT TTGGGAAAGGTTAGATAGTTTAATTATTTTATATCCTACTGATTATCGTTTTTCTAAAAAATGGCGAAAGGAAGCAGAAA AACAAATGATTGCTTTAGGAAAATCTGGAATGAGCGATGATGAAATTGAAAGGTTTGTGGATTATTTTTGGCAAGCATTA CATCCAGAGTTGTTTATTAAGCCACTTATCAATAATCAAGAGTTGGTAGATTTAGTGATAGAAATTAATTCGGATCATTC TTGGGAAAATATTTATCAGCCCAAGTCTTGA
Upstream 100 bases:
>100_bases TAGGTTTTTGCCTCTTATTAAGTAGCTACTTTATTAATTTGAAAAAGGATATGATGTTATAAGTATTTAGCTTAATTCTT AGATAGTATCTATAATTTTT
Downstream 100 bases:
>100_bases ATAGGATTTTTCTGTTAGTTTCAGATAATTTTATAGGGAACTTTCAGAAAAAGAGAATATACTGAGCTAAGGTTTTTCTA ATTTTTGCTAAAGCTCAATT
Product: glycerate kinase
Products: NA
Alternate protein names: Glycerate Kinase; Phosphoribulokinase/Uridine Kinase Family Protein; Kinase-Like Protein; Phosphoribulokinase/Uridine Kinase Family; Kinase-Like; Protein With Kinase Domain; Kinase Domain-Containing Protein
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MGFFDFEVGQILQFLQQGNSLEKKELEILASQELIDKKRAHVFNITSANVREVIMERSLLFQSVISDYDKFPLRDYNTLA ILWKLWLPLGIKLASKCQGLSRPFIQGILGGQGTGKTTLAKILVLVLDKLGYKTISFSIDDIYKTYAERQLLQRQDSRLI WRGPPGTHDVSLGIEVLDKLRQSKSENSDGLIAIPRFNKSLFNGAGDRVEPEIVSKVDIILFEGWFVGVRPVEDKVFDMA KLLPIITEADRKFARDMNKNLMQYLPLWERLDSLIILYPTDYRFSKKWRKEAEKQMIALGKSGMSDDEIERFVDYFWQAL HPELFIKPLINNQELVDLVIEINSDHSWENIYQPKS
Sequences:
>Translated_356_residues MGFFDFEVGQILQFLQQGNSLEKKELEILASQELIDKKRAHVFNITSANVREVIMERSLLFQSVISDYDKFPLRDYNTLA ILWKLWLPLGIKLASKCQGLSRPFIQGILGGQGTGKTTLAKILVLVLDKLGYKTISFSIDDIYKTYAERQLLQRQDSRLI WRGPPGTHDVSLGIEVLDKLRQSKSENSDGLIAIPRFNKSLFNGAGDRVEPEIVSKVDIILFEGWFVGVRPVEDKVFDMA KLLPIITEADRKFARDMNKNLMQYLPLWERLDSLIILYPTDYRFSKKWRKEAEKQMIALGKSGMSDDEIERFVDYFWQAL HPELFIKPLINNQELVDLVIEINSDHSWENIYQPKS >Mature_355_residues GFFDFEVGQILQFLQQGNSLEKKELEILASQELIDKKRAHVFNITSANVREVIMERSLLFQSVISDYDKFPLRDYNTLAI LWKLWLPLGIKLASKCQGLSRPFIQGILGGQGTGKTTLAKILVLVLDKLGYKTISFSIDDIYKTYAERQLLQRQDSRLIW RGPPGTHDVSLGIEVLDKLRQSKSENSDGLIAIPRFNKSLFNGAGDRVEPEIVSKVDIILFEGWFVGVRPVEDKVFDMAK LLPIITEADRKFARDMNKNLMQYLPLWERLDSLIILYPTDYRFSKKWRKEAEKQMIALGKSGMSDDEIERFVDYFWQALH PELFIKPLINNQELVDLVIEINSDHSWENIYQPKS
Specific function: Unknown
COG id: COG4240
COG function: function code R; Predicted kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321644, Length=284, Percent_Identity=28.169014084507, Blast_Score=96, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41150; Mature: 41019
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFFDFEVGQILQFLQQGNSLEKKELEILASQELIDKKRAHVFNITSANVREVIMERSLL CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHH FQSVISDYDKFPLRDYNTLAILWKLWLPLGIKLASKCQGLSRPFIQGILGGQGTGKTTLA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHH KILVLVLDKLGYKTISFSIDDIYKTYAERQLLQRQDSRLIWRGPPGTHDVSLGIEVLDKL HHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHH RQSKSENSDGLIAIPRFNKSLFNGAGDRVEPEIVSKVDIILFEGWFVGVRPVEDKVFDMA HHHCCCCCCCEEEEECCCHHHHCCCCCCCCHHHHHHHHEEEEECEEECCCCHHHHHHHHH KLLPIITEADRKFARDMNKNLMQYLPLWERLDSLIILYPTDYRFSKKWRKEAEKQMIALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHC KSGMSDDEIERFVDYFWQALHPELFIKPLINNQELVDLVIEINSDHSWENIYQPKS CCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEEEEEECCCCCHHCCCCCCC >Mature Secondary Structure GFFDFEVGQILQFLQQGNSLEKKELEILASQELIDKKRAHVFNITSANVREVIMERSLL CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHH FQSVISDYDKFPLRDYNTLAILWKLWLPLGIKLASKCQGLSRPFIQGILGGQGTGKTTLA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHH KILVLVLDKLGYKTISFSIDDIYKTYAERQLLQRQDSRLIWRGPPGTHDVSLGIEVLDKL HHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHH RQSKSENSDGLIAIPRFNKSLFNGAGDRVEPEIVSKVDIILFEGWFVGVRPVEDKVFDMA HHHCCCCCCCEEEEECCCHHHHCCCCCCCCHHHHHHHHEEEEECEEECCCCHHHHHHHHH KLLPIITEADRKFARDMNKNLMQYLPLWERLDSLIILYPTDYRFSKKWRKEAEKQMIALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHC KSGMSDDEIERFVDYFWQALHPELFIKPLINNQELVDLVIEINSDHSWENIYQPKS CCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEEEEEECCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA