| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113477192
Identifier: 113477192
GI number: 113477192
Start: 5711369
End: 5711677
Strand: Reverse
Name: 113477192
Synonym: Tery_3723
Alternate gene names: NA
Gene position: 5711677-5711369 (Counterclockwise)
Preceding gene: 113477193
Following gene: 113477191
Centisome position: 73.7
GC content: 34.3
Gene sequence:
>309_bases ATGGAGAAACTTGCCTATATATATGACTTTTTATTCAACTCTTTTTTTTTAGGAAAATACAATCAAGCATTTAATAATTT TCCCAAAAGCAAGGCTAATTCATTTAGATCATTTAGCTCATGTTCTGAAGCACTCCAATATTCTTTCCCATCGCCGAATT TTTCCATTTATTCTTCCTTAGTAGAAAATCACCAACTTTTATTTCATCTTCTGAGGCTCCGAAAAAGCGGCGCGGCGCAA AATCTTTCCTCCCCTTCTCAGATTTTTTTTGTGATCTTATTAGATGGAGAAGCCTGCCTATATATATGA
Upstream 100 bases:
>100_bases TCACCAACTTTTTTTTCATTTTCTGGAGCTCCGAAAAAGAGGCGCGGCGCAGAAATTTTTCTCCCCTTCTCAGATTTTTT TTGTGATATTATAAGATTAG
Downstream 100 bases:
>100_bases CTTTTTATTCAACTCTTTTTTTTTAGGAAAATACAATCAAGGATTTAATAATTTTCCCAAAAGCAAGACTAATTTATTTA GCTCATTCAGATCATTTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MEKLAYIYDFLFNSFFLGKYNQAFNNFPKSKANSFRSFSSCSEALQYSFPSPNFSIYSSLVENHQLLFHLLRLRKSGAAQ NLSSPSQIFFVILLDGEACLYI
Sequences:
>Translated_102_residues MEKLAYIYDFLFNSFFLGKYNQAFNNFPKSKANSFRSFSSCSEALQYSFPSPNFSIYSSLVENHQLLFHLLRLRKSGAAQ NLSSPSQIFFVILLDGEACLYI >Mature_102_residues MEKLAYIYDFLFNSFFLGKYNQAFNNFPKSKANSFRSFSSCSEALQYSFPSPNFSIYSSLVENHQLLFHLLRLRKSGAAQ NLSSPSQIFFVILLDGEACLYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11730; Mature: 11730
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLAYIYDFLFNSFFLGKYNQAFNNFPKSKANSFRSFSSCSEALQYSFPSPNFSIYSSL CCHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VENHQLLFHLLRLRKSGAAQNLSSPSQIFFVILLDGEACLYI HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEECC >Mature Secondary Structure MEKLAYIYDFLFNSFFLGKYNQAFNNFPKSKANSFRSFSSCSEALQYSFPSPNFSIYSSL CCHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VENHQLLFHLLRLRKSGAAQNLSSPSQIFFVILLDGEACLYI HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA