| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477190
Identifier: 113477190
GI number: 113477190
Start: 5710528
End: 5710809
Strand: Reverse
Name: 113477190
Synonym: Tery_3721
Alternate gene names: NA
Gene position: 5710809-5710528 (Counterclockwise)
Preceding gene: 113477191
Following gene: 113477179
Centisome position: 73.69
GC content: 34.04
Gene sequence:
>282_bases ATGGAAAAGCTTGCCTATATACATGACTTTTTATTCAACTCTTTTTTTTCAGGAAAATACAATCAAGGATTTAATAATTT TCCCAAAAGCAAGGCTAATTCATTTAACTCATTTAGCTCATGTTCTGAAGCACTCCAATATTCTTTCCCATCGCGGAAAT TTTCCATTTATTCTTCCTTAGTAGAAAATCGCCAACTTTTATTTCATCTTCTGGGGCTCCGAAAAAACGGCGCGGCGCAG AAATTTTTCTCCCCTTCTCAGATTTTTTTTGTGATATTATAA
Upstream 100 bases:
>100_bases TCACCAACTTTTATTTCATCTTCTGAGGCTCCAAAAAAGCGGCGCGGCGCAGAAATTTTTCTCCCCTTCTCAGATTTTTT TTGTGATATTATAAGATTAG
Downstream 100 bases:
>100_bases GATTAGATGGAGAAGCTTGCCTATATACATGACTTTTTATTCAGCTCTTTTTTTTCAGGAAAATACAATCAAGGATTTAA TAATTTTCCCAAAAGCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MEKLAYIHDFLFNSFFSGKYNQGFNNFPKSKANSFNSFSSCSEALQYSFPSRKFSIYSSLVENRQLLFHLLGLRKNGAAQ KFFSPSQIFFVIL
Sequences:
>Translated_93_residues MEKLAYIHDFLFNSFFSGKYNQGFNNFPKSKANSFNSFSSCSEALQYSFPSRKFSIYSSLVENRQLLFHLLGLRKNGAAQ KFFSPSQIFFVIL >Mature_93_residues MEKLAYIHDFLFNSFFSGKYNQGFNNFPKSKANSFNSFSSCSEALQYSFPSRKFSIYSSLVENRQLLFHLLGLRKNGAAQ KFFSPSQIFFVIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10772; Mature: 10772
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLAYIHDFLFNSFFSGKYNQGFNNFPKSKANSFNSFSSCSEALQYSFPSRKFSIYSSL CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH VENRQLLFHLLGLRKNGAAQKFFSPSQIFFVIL HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MEKLAYIHDFLFNSFFSGKYNQGFNNFPKSKANSFNSFSSCSEALQYSFPSRKFSIYSSL CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH VENRQLLFHLLGLRKNGAAQKFFSPSQIFFVIL HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA