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The map label for this gene is 113477168

Identifier: 113477168

GI number: 113477168

Start: 5676807

End: 5678192

Strand: Reverse

Name: 113477168

Synonym: Tery_3696

Alternate gene names: NA

Gene position: 5678192-5676807 (Counterclockwise)

Preceding gene: 113477169

Following gene: 113477166

Centisome position: 73.27

GC content: 40.84

Gene sequence:

>1386_bases
ATGAACTCAGTTTGGAAAAAGTTAACACTAACTAATCTCTCATTCTCTGACTCTGAATGGTTAAATGCAAGCTATCTCTA
TGGTTTACTTAATGGTTCCCTCTATAACTGGCGACGTGGTAGTTGGTTAATGCAATGGGGAGAACCTCTTGGTTTTGTGT
TGCTAGCAATTGTATTTACTCTAGCTCCTTTTGTAAATACTACTCTCATTGGTTTCTTATTACTTGCTAGCGCTGGTTTT
TGGGTATTGCTGAAGGTCTCGGATAACACCCAGGAATATTTAACTCCTATTCATCTATTAATATTCCTCTACTGGAGTAT
TGCGACATTGGCAGTGGTGATATCTCCGGCAAAGACTGCTGCTTTTAGTGGCTGGGTAAAGTTGACTCTTTATTTATTGT
TGTTTGCTTCGGGGTCTTTGGTATTAAGATCCCCTAGACTCCGCTCTTGGTTAATCAATATTTATTTGTTGGTTTCTCTA
GTTGTTAGTTTTTATGGTATTCGCCAATGGATAGATAAGGTTGAACCTCTGGCTACCTGGAATGATCCTACTTCTGCTCA
AGCAGGTGCGACTCGTGTTTATAGTTATTTGGGAAATCCTAATTTATTGGGTGGATATTTGTTGCCTGCTATTGCTTTGA
GTTTTGTGGCAATTTTTGCTTGGAGTAGTTGGGCTCGAAAATCTCTGGCAGTAACAATATTGCTGGTGAGTTGTGCTTGT
TTGCGTTATACAGGTAGTCGAGGTAGTTGGATTGGGTTTTTAGCTTTGATGTTTGCTATGTTGATTTTAATGTGGTATTG
GTGGAGGAGCTATATGCCCAGTTTTTGGCAAATTTGGTCTCTGCCTATAGCTGTGGGTAGTTTTGCCGGGTTGTTGATTT
TAGCGGTGGTGTTGTTAGAACCTTTGCGCGATCGCGTCCTGAGTGTTTTTGCGGGTCGTCAAGATAGCAGTAATAATTTT
CGGATGAATGTTTGGATGTCTGTTTTTGATATGATTCGCGATCGCCCTATTTTGGGTATTGGACCGGGTAATGATGTGTT
TAATAAGATTTATCCTCTCTATCAGCGTCCCCGTTATAGTGCTTTGAGTTCTTATTCTGTGCCTTTGGAAATTGTTGTGG
AAACTGGTTTTATTGGTTTGACTGCTTTTTTGTGGTTGCTTTTGGTGACTTTTAATCAGGGTGTATTGCAGTTGAAACGT
TTGCGAGATGCTGATAACCCTCAAGGATATTGGTTAATTGGTGCGATAGCTGCTATGGTGGGCTTGATAGGTCATGGTTT
GGTGGATACGGTCTGGTATCGTCCCCAAGTTAATACTATTTGGTGGTTGATGGTGGCTATTATTGCTAGTTATAGCAGTC
AACAGGGGGTACGGAGTAGGGAATAG

Upstream 100 bases:

>100_bases
TCCTACTATTAGGAAATGTAGATAAGTTTTGAGAAATGGGATAATTTCTATTATGTGGGTAACTCCTGTTATTATTTTTG
TTGGTATCATAAAATAAACA

Downstream 100 bases:

>100_bases
TTAGCCCTGTAGGTTTGGTTTCAGAACGAAACCCAACAAATAAGTACCGTACTAATTCAAAGGTCAAAGGTAGTCCCTGA
ATTATTTTAGTATTTATAAG

Product: O-antigen polymerase

Products: NA

Alternate protein names: O-Antigen Polymerase; Inorganic Carbon Transporter; O-Antigen Polymerase Family; Heptosyltransferase Family; IctB Family Bicarbonate Transporter; Integral Membrane Protein; Bicarbonate Transporter ICT Family Protein

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MNSVWKKLTLTNLSFSDSEWLNASYLYGLLNGSLYNWRRGSWLMQWGEPLGFVLLAIVFTLAPFVNTTLIGFLLLASAGF
WVLLKVSDNTQEYLTPIHLLIFLYWSIATLAVVISPAKTAAFSGWVKLTLYLLLFASGSLVLRSPRLRSWLINIYLLVSL
VVSFYGIRQWIDKVEPLATWNDPTSAQAGATRVYSYLGNPNLLGGYLLPAIALSFVAIFAWSSWARKSLAVTILLVSCAC
LRYTGSRGSWIGFLALMFAMLILMWYWWRSYMPSFWQIWSLPIAVGSFAGLLILAVVLLEPLRDRVLSVFAGRQDSSNNF
RMNVWMSVFDMIRDRPILGIGPGNDVFNKIYPLYQRPRYSALSSYSVPLEIVVETGFIGLTAFLWLLLVTFNQGVLQLKR
LRDADNPQGYWLIGAIAAMVGLIGHGLVDTVWYRPQVNTIWWLMVAIIASYSSQQGVRSRE

Sequences:

>Translated_461_residues
MNSVWKKLTLTNLSFSDSEWLNASYLYGLLNGSLYNWRRGSWLMQWGEPLGFVLLAIVFTLAPFVNTTLIGFLLLASAGF
WVLLKVSDNTQEYLTPIHLLIFLYWSIATLAVVISPAKTAAFSGWVKLTLYLLLFASGSLVLRSPRLRSWLINIYLLVSL
VVSFYGIRQWIDKVEPLATWNDPTSAQAGATRVYSYLGNPNLLGGYLLPAIALSFVAIFAWSSWARKSLAVTILLVSCAC
LRYTGSRGSWIGFLALMFAMLILMWYWWRSYMPSFWQIWSLPIAVGSFAGLLILAVVLLEPLRDRVLSVFAGRQDSSNNF
RMNVWMSVFDMIRDRPILGIGPGNDVFNKIYPLYQRPRYSALSSYSVPLEIVVETGFIGLTAFLWLLLVTFNQGVLQLKR
LRDADNPQGYWLIGAIAAMVGLIGHGLVDTVWYRPQVNTIWWLMVAIIASYSSQQGVRSRE
>Mature_461_residues
MNSVWKKLTLTNLSFSDSEWLNASYLYGLLNGSLYNWRRGSWLMQWGEPLGFVLLAIVFTLAPFVNTTLIGFLLLASAGF
WVLLKVSDNTQEYLTPIHLLIFLYWSIATLAVVISPAKTAAFSGWVKLTLYLLLFASGSLVLRSPRLRSWLINIYLLVSL
VVSFYGIRQWIDKVEPLATWNDPTSAQAGATRVYSYLGNPNLLGGYLLPAIALSFVAIFAWSSWARKSLAVTILLVSCAC
LRYTGSRGSWIGFLALMFAMLILMWYWWRSYMPSFWQIWSLPIAVGSFAGLLILAVVLLEPLRDRVLSVFAGRQDSSNNF
RMNVWMSVFDMIRDRPILGIGPGNDVFNKIYPLYQRPRYSALSSYSVPLEIVVETGFIGLTAFLWLLLVTFNQGVLQLKR
LRDADNPQGYWLIGAIAAMVGLIGHGLVDTVWYRPQVNTIWWLMVAIIASYSSQQGVRSRE

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52105; Mature: 52105

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVWKKLTLTNLSFSDSEWLNASYLYGLLNGSLYNWRRGSWLMQWGEPLGFVLLAIVFT
CCCHHHHHHEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHH
LAPFVNTTLIGFLLLASAGFWVLLKVSDNTQEYLTPIHLLIFLYWSIATLAVVISPAKTA
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AFSGWVKLTLYLLLFASGSLVLRSPRLRSWLINIYLLVSLVVSFYGIRQWIDKVEPLATW
HHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NDPTSAQAGATRVYSYLGNPNLLGGYLLPAIALSFVAIFAWSSWARKSLAVTILLVSCAC
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRYTGSRGSWIGFLALMFAMLILMWYWWRSYMPSFWQIWSLPIAVGSFAGLLILAVVLLE
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLRDRVLSVFAGRQDSSNNFRMNVWMSVFDMIRDRPILGIGPGNDVFNKIYPLYQRPRYS
HHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCHH
ALSSYSVPLEIVVETGFIGLTAFLWLLLVTFNQGVLQLKRLRDADNPQGYWLIGAIAAMV
HHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
GLIGHGLVDTVWYRPQVNTIWWLMVAIIASYSSQQGVRSRE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNSVWKKLTLTNLSFSDSEWLNASYLYGLLNGSLYNWRRGSWLMQWGEPLGFVLLAIVFT
CCCHHHHHHEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHH
LAPFVNTTLIGFLLLASAGFWVLLKVSDNTQEYLTPIHLLIFLYWSIATLAVVISPAKTA
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AFSGWVKLTLYLLLFASGSLVLRSPRLRSWLINIYLLVSLVVSFYGIRQWIDKVEPLATW
HHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NDPTSAQAGATRVYSYLGNPNLLGGYLLPAIALSFVAIFAWSSWARKSLAVTILLVSCAC
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRYTGSRGSWIGFLALMFAMLILMWYWWRSYMPSFWQIWSLPIAVGSFAGLLILAVVLLE
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLRDRVLSVFAGRQDSSNNFRMNVWMSVFDMIRDRPILGIGPGNDVFNKIYPLYQRPRYS
HHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCHH
ALSSYSVPLEIVVETGFIGLTAFLWLLLVTFNQGVLQLKRLRDADNPQGYWLIGAIAAMV
HHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
GLIGHGLVDTVWYRPQVNTIWWLMVAIIASYSSQQGVRSRE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA