Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477106

Identifier: 113477106

GI number: 113477106

Start: 5569827

End: 5570786

Strand: Reverse

Name: 113477106

Synonym: Tery_3624

Alternate gene names: NA

Gene position: 5570786-5569827 (Counterclockwise)

Preceding gene: 113477107

Following gene: 113477104

Centisome position: 71.88

GC content: 37.19

Gene sequence:

>960_bases
ATGAGCAGCACTTCAAAAAAATTATCTACTCTTACTAAGTCCTTATTTTCAGCTCAGATTATTGTAATGACAGGTCTTAT
TTGGGGTGTATTAGCCCTATTATTTTTTCTATTATTTAGTGTACCTCTACCAGGAGAAGAATTACCATCCTGGTACTCTG
TTGGCACCTATATATTTGAACTAGGGGCTTACTTAATAGCCACTATAATTAGCTTCAGAAATTGGCAAAGTCCTCAAATG
GTTAGTGGCCGAAATGTTTGGATTGGTATTAGTTTAGGATTATTATTTTACTTTATTGGTGGTCTTGTGTTTGGCTGCTG
GGAATTAATCTGGGAACTGGACCCAGATGTATCATTAGCAGATATATTTTACGTTTTTTCCTACATATTTTTAGCTTGGG
GTATGACTCTAGCTATAACTGCCAAAAAGCTAAATTTAGAATTTTGGCAGTGGGTGGTTTTGGCTTTAGTCGCGGCTGGA
GGAGTTCTTTTGGCTATTTTTGTAGCTGACCCTTCGTTTTTTGGTTTATTGTCTACGCCAGATACTACGGTTTTGGAAGA
GCTAGATACAATAAAAATAGAATCAGCTCAATTAGCTCCATCTTGGGTACTTGCTCTAGATAATAAATTAGAACCTTTTT
CTTTTTGGTTGAATTTATTCTATATTATTGCCGATGTATTTCTACTAATTATTGCCACAGCTCTACTTCTAGCCTTTTGG
GGAGGACGTTTTTCTCAGTCCTGGCGGATGATTGCTGGCGCTACATTTTCATTATACATTGCTGATATGTATTTTAAGTG
GGCAGATTCCCAGACTACTGGAGAATATGAAAGTGGAGGTCTCTTAGAGGTATTTTTTGTATTTACTGCAATTCTATTTG
CAATAGGTGCAGTGCTAGAATACGATATCTCAACTCGTTCCCGCCAAAGTAGACGTAGTAGACGCAGCAGTTCTTCTTAA

Upstream 100 bases:

>100_bases
CTGATTAAAATTATCTTTATCTCGGAGGAAATAAAACTACAATTGTTGAGTAATAGGGATAAAATGTTTGTTGACAGTAG
CCCTTAATCAGAATATTTCT

Downstream 100 bases:

>100_bases
AACTAAAGTATCTTCTCTAAACCATAAATGAGCTTGGTTAAAGATTGGACTTTACGAATGGCTAACAAAACTCCAGGCAT
ATAGCAAGACCTATCTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSSTSKKLSTLTKSLFSAQIIVMTGLIWGVLALLFFLLFSVPLPGEELPSWYSVGTYIFELGAYLIATIISFRNWQSPQM
VSGRNVWIGISLGLLFYFIGGLVFGCWELIWELDPDVSLADIFYVFSYIFLAWGMTLAITAKKLNLEFWQWVVLALVAAG
GVLLAIFVADPSFFGLLSTPDTTVLEELDTIKIESAQLAPSWVLALDNKLEPFSFWLNLFYIIADVFLLIIATALLLAFW
GGRFSQSWRMIAGATFSLYIADMYFKWADSQTTGEYESGGLLEVFFVFTAILFAIGAVLEYDISTRSRQSRRSRRSSSS

Sequences:

>Translated_319_residues
MSSTSKKLSTLTKSLFSAQIIVMTGLIWGVLALLFFLLFSVPLPGEELPSWYSVGTYIFELGAYLIATIISFRNWQSPQM
VSGRNVWIGISLGLLFYFIGGLVFGCWELIWELDPDVSLADIFYVFSYIFLAWGMTLAITAKKLNLEFWQWVVLALVAAG
GVLLAIFVADPSFFGLLSTPDTTVLEELDTIKIESAQLAPSWVLALDNKLEPFSFWLNLFYIIADVFLLIIATALLLAFW
GGRFSQSWRMIAGATFSLYIADMYFKWADSQTTGEYESGGLLEVFFVFTAILFAIGAVLEYDISTRSRQSRRSRRSSSS
>Mature_318_residues
SSTSKKLSTLTKSLFSAQIIVMTGLIWGVLALLFFLLFSVPLPGEELPSWYSVGTYIFELGAYLIATIISFRNWQSPQMV
SGRNVWIGISLGLLFYFIGGLVFGCWELIWELDPDVSLADIFYVFSYIFLAWGMTLAITAKKLNLEFWQWVVLALVAAGG
VLLAIFVADPSFFGLLSTPDTTVLEELDTIKIESAQLAPSWVLALDNKLEPFSFWLNLFYIIADVFLLIIATALLLAFWG
GRFSQSWRMIAGATFSLYIADMYFKWADSQTTGEYESGGLLEVFFVFTAILFAIGAVLEYDISTRSRQSRRSRRSSSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35786; Mature: 35655

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTSKKLSTLTKSLFSAQIIVMTGLIWGVLALLFFLLFSVPLPGEELPSWYSVGTYIFE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LGAYLIATIISFRNWQSPQMVSGRNVWIGISLGLLFYFIGGLVFGCWELIWELDPDVSLA
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
DIFYVFSYIFLAWGMTLAITAKKLNLEFWQWVVLALVAAGGVLLAIFVADPSFFGLLSTP
HHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHCHHHEEHEEECCCCEEECCCC
DTTVLEELDTIKIESAQLAPSWVLALDNKLEPFSFWLNLFYIIADVFLLIIATALLLAFW
CHHHHHHHHHHEECCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGRFSQSWRMIAGATFSLYIADMYFKWADSQTTGEYESGGLLEVFFVFTAILFAIGAVLE
CCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YDISTRSRQSRRSRRSSSS
HCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSTSKKLSTLTKSLFSAQIIVMTGLIWGVLALLFFLLFSVPLPGEELPSWYSVGTYIFE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LGAYLIATIISFRNWQSPQMVSGRNVWIGISLGLLFYFIGGLVFGCWELIWELDPDVSLA
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
DIFYVFSYIFLAWGMTLAITAKKLNLEFWQWVVLALVAAGGVLLAIFVADPSFFGLLSTP
HHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHCHHHEEHEEECCCCEEECCCC
DTTVLEELDTIKIESAQLAPSWVLALDNKLEPFSFWLNLFYIIADVFLLIIATALLLAFW
CHHHHHHHHHHEECCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGRFSQSWRMIAGATFSLYIADMYFKWADSQTTGEYESGGLLEVFFVFTAILFAIGAVLE
CCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YDISTRSRQSRRSRRSSSS
HCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA