Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476964

Identifier: 113476964

GI number: 113476964

Start: 5294786

End: 5295823

Strand: Reverse

Name: 113476964

Synonym: Tery_3460

Alternate gene names: NA

Gene position: 5295823-5294786 (Counterclockwise)

Preceding gene: 113476967

Following gene: 113476963

Centisome position: 68.33

GC content: 30.92

Gene sequence:

>1038_bases
ATGAATATTATAGATAAACTAAATGATTTTATTAATCAAACAAAAGAGTCTAAAGAAATTAAAAGGGCCTTGGCCGTAAA
AATGACCTTGTCAGGAAAATCCTACCATGAAGTCAAAGAATTATTAAATGTTTCTCACAGTTTTATTAGTGAATGGAAAA
ACCAAGCATTATTTCATGGTGTAGAAAGTTTAAGGCTTCAGTATCAAGGGAGACAAGGTTACTTAAAAACGGTCGAAAAA
GAGAAAACAATTGAGTGGTTGAGAGCACAAGATTATCTTAGGTTATCAGATTTAAAAAACTACTTACAGGAGCAATATGA
TGTGGTTTTTGAGTCTAATCAAAGTTACTATAACTTGTTTAAAGAAGCGGGCATAAGTTGGAAAAAAACTCAAAAAAAGA
ATCCTGCTAAAAATGATGAATTAGTAGAAGTTAAAAGAAAAGAAATACAGGAATTTTTAGCTAAATGGCAACCAGAAATA
GAAACTGGAAAGCTTACAGTGTTTATGATTGATGAATGTCATCTTCTATGGGGAGACATATTAGGTTATGCTTGGGGAAA
AACAGATGAAAGAATAGAAATTGCAATTAAAAATGAAAAAGAAAGACAGACTTATTATGGAGCTTTAGACTATAAAACCA
AGGAATTTCTTGTGCAAGAATATGAGAGTGGAAATACTAAAAATACTATTGAATTTATTAAATATTTGCAGAAGCAAAGA
CCGGGCAACAAATTGGCAATATTTTGGGATGGGGCAACTTACCATAACTCTCAAGAATTTCGAGAATATTTAATGACAAT
TAATCAATACTTATCAGAAGAAGAATTGTTGATAAATTGTACAAGATTTGCTCCCAATGCTCCGGAGCAAAATCCTGTTG
AAGATATTTGGTTACAAACCAAAAATTTCAGTATTACTTTTTATCATCTTTGCAGTTCTTTTAAAGTAGTTAAGTGGCTA
TTTAAGTTTTTTGCGGATGGTCAAATATTCAATTTCCCAAAACTTTTTCAGTATGAAATTTTGCCGCAACCTACTTAG

Upstream 100 bases:

>100_bases
AAACTGTGGGGAGTTAATCCTATTACAGATATATAGCAATCCCATATTGGTCGCAACAGATATAATAGTAAGAATAACAG
ATCTAAGAAAAAGACAAAAA

Downstream 100 bases:

>100_bases
GATTGCTATAGTTTTTATAGATTCTCAAGTAGAAGACTATGAGAGTTTAGTGAATGGAGCTTTGTCTGGGGTCAAGGTGG
TTATTCTCAACTCAATAGAA

Product: transposase

Products: NA

Alternate protein names: Transposase Family Protein; Transposase Of

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MNIIDKLNDFINQTKESKEIKRALAVKMTLSGKSYHEVKELLNVSHSFISEWKNQALFHGVESLRLQYQGRQGYLKTVEK
EKTIEWLRAQDYLRLSDLKNYLQEQYDVVFESNQSYYNLFKEAGISWKKTQKKNPAKNDELVEVKRKEIQEFLAKWQPEI
ETGKLTVFMIDECHLLWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKNTIEFIKYLQKQR
PGNKLAIFWDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAPEQNPVEDIWLQTKNFSITFYHLCSSFKVVKWL
FKFFADGQIFNFPKLFQYEILPQPT

Sequences:

>Translated_345_residues
MNIIDKLNDFINQTKESKEIKRALAVKMTLSGKSYHEVKELLNVSHSFISEWKNQALFHGVESLRLQYQGRQGYLKTVEK
EKTIEWLRAQDYLRLSDLKNYLQEQYDVVFESNQSYYNLFKEAGISWKKTQKKNPAKNDELVEVKRKEIQEFLAKWQPEI
ETGKLTVFMIDECHLLWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKNTIEFIKYLQKQR
PGNKLAIFWDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAPEQNPVEDIWLQTKNFSITFYHLCSSFKVVKWL
FKFFADGQIFNFPKLFQYEILPQPT
>Mature_345_residues
MNIIDKLNDFINQTKESKEIKRALAVKMTLSGKSYHEVKELLNVSHSFISEWKNQALFHGVESLRLQYQGRQGYLKTVEK
EKTIEWLRAQDYLRLSDLKNYLQEQYDVVFESNQSYYNLFKEAGISWKKTQKKNPAKNDELVEVKRKEIQEFLAKWQPEI
ETGKLTVFMIDECHLLWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKNTIEFIKYLQKQR
PGNKLAIFWDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAPEQNPVEDIWLQTKNFSITFYHLCSSFKVVKWL
FKFFADGQIFNFPKLFQYEILPQPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41110; Mature: 41110

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIDKLNDFINQTKESKEIKRALAVKMTLSGKSYHEVKELLNVSHSFISEWKNQALFHG
CCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VESLRLQYQGRQGYLKTVEKEKTIEWLRAQDYLRLSDLKNYLQEQYDVVFESNQSYYNLF
HHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KEAGISWKKTQKKNPAKNDELVEVKRKEIQEFLAKWQPEIETGKLTVFMIDECHLLWGDI
HHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHH
LGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKNTIEFIKYLQKQR
HHHHCCCCCCEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHC
PGNKLAIFWDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAPEQNPVEDIWLQT
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHEEEEHHCCCCCCCCCCHHHHHEEC
KNFSITFYHLCSSFKVVKWLFKFFADGQIFNFPKLFQYEILPQPT
CCCCEEHHHHHHHHHHHHHHHHHHCCCCEECCCHHHEEECCCCCC
>Mature Secondary Structure
MNIIDKLNDFINQTKESKEIKRALAVKMTLSGKSYHEVKELLNVSHSFISEWKNQALFHG
CCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VESLRLQYQGRQGYLKTVEKEKTIEWLRAQDYLRLSDLKNYLQEQYDVVFESNQSYYNLF
HHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KEAGISWKKTQKKNPAKNDELVEVKRKEIQEFLAKWQPEIETGKLTVFMIDECHLLWGDI
HHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHH
LGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKNTIEFIKYLQKQR
HHHHCCCCCCEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHC
PGNKLAIFWDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAPEQNPVEDIWLQT
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHEEEEHHCCCCCCCCCCHHHHHEEC
KNFSITFYHLCSSFKVVKWLFKFFADGQIFNFPKLFQYEILPQPT
CCCCEEHHHHHHHHHHHHHHHHHHCCCCEECCCHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA