Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113476962
Identifier: 113476962
GI number: 113476962
Start: 5284819
End: 5285067
Strand: Reverse
Name: 113476962
Synonym: Tery_3458
Alternate gene names: NA
Gene position: 5285067-5284819 (Counterclockwise)
Preceding gene: 113476963
Following gene: 113476960
Centisome position: 68.19
GC content: 45.78
Gene sequence:
>249_bases ATGGAGACCAGGAATTACAGCGACAACACTACCCCCAGTTGGGAAGGTGTTGTCGTTGAAGCTAATAACTCAGGAGGTTC TCGCTTCCTACTCCAAGGTCAGAATAACCTGAGTGAGCAAGGTTATATCTGGACTACCAATTCTCAGGGTGTCATTACTC GCGGTTCTGGTTGGAAATCAGGAGATGCTCTGTTGCAATGGGAAGAGGAGTTTGATATTGACCTGAATGGAGATAGTATA ATTGCCTGA
Upstream 100 bases:
>100_bases AGCGGGAATGTAATTTATTGAATAGACATCTCTGGAAACATTGAATCCGAAGGTACAGCAACTTTTGCCAAAGATGCAGA GCATACCTACTAGATAATCA
Downstream 100 bases:
>100_bases CTCTGACAAATCTTATTAAATATCTGCAAAAATCAAGACTTAATCACCTTTTTTATTCTAATATTTAGATATTTTCATAG AAAAAAAGAGATAATATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues METRNYSDNTTPSWEGVVVEANNSGGSRFLLQGQNNLSEQGYIWTTNSQGVITRGSGWKSGDALLQWEEEFDIDLNGDSI IA
Sequences:
>Translated_82_residues METRNYSDNTTPSWEGVVVEANNSGGSRFLLQGQNNLSEQGYIWTTNSQGVITRGSGWKSGDALLQWEEEFDIDLNGDSI IA >Mature_82_residues METRNYSDNTTPSWEGVVVEANNSGGSRFLLQGQNNLSEQGYIWTTNSQGVITRGSGWKSGDALLQWEEEFDIDLNGDSI IA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9057; Mature: 9057
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METRNYSDNTTPSWEGVVVEANNSGGSRFLLQGQNNLSEQGYIWTTNSQGVITRGSGWKS CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEECCCCCEEECCCCCCC GDALLQWEEEFDIDLNGDSIIA CCEEEEECCCCCEEECCCEEEC >Mature Secondary Structure METRNYSDNTTPSWEGVVVEANNSGGSRFLLQGQNNLSEQGYIWTTNSQGVITRGSGWKS CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEECCCCCEEECCCCCCC GDALLQWEEEFDIDLNGDSIIA CCEEEEECCCCCEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA