Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476962

Identifier: 113476962

GI number: 113476962

Start: 5284819

End: 5285067

Strand: Reverse

Name: 113476962

Synonym: Tery_3458

Alternate gene names: NA

Gene position: 5285067-5284819 (Counterclockwise)

Preceding gene: 113476963

Following gene: 113476960

Centisome position: 68.19

GC content: 45.78

Gene sequence:

>249_bases
ATGGAGACCAGGAATTACAGCGACAACACTACCCCCAGTTGGGAAGGTGTTGTCGTTGAAGCTAATAACTCAGGAGGTTC
TCGCTTCCTACTCCAAGGTCAGAATAACCTGAGTGAGCAAGGTTATATCTGGACTACCAATTCTCAGGGTGTCATTACTC
GCGGTTCTGGTTGGAAATCAGGAGATGCTCTGTTGCAATGGGAAGAGGAGTTTGATATTGACCTGAATGGAGATAGTATA
ATTGCCTGA

Upstream 100 bases:

>100_bases
AGCGGGAATGTAATTTATTGAATAGACATCTCTGGAAACATTGAATCCGAAGGTACAGCAACTTTTGCCAAAGATGCAGA
GCATACCTACTAGATAATCA

Downstream 100 bases:

>100_bases
CTCTGACAAATCTTATTAAATATCTGCAAAAATCAAGACTTAATCACCTTTTTTATTCTAATATTTAGATATTTTCATAG
AAAAAAAGAGATAATATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
METRNYSDNTTPSWEGVVVEANNSGGSRFLLQGQNNLSEQGYIWTTNSQGVITRGSGWKSGDALLQWEEEFDIDLNGDSI
IA

Sequences:

>Translated_82_residues
METRNYSDNTTPSWEGVVVEANNSGGSRFLLQGQNNLSEQGYIWTTNSQGVITRGSGWKSGDALLQWEEEFDIDLNGDSI
IA
>Mature_82_residues
METRNYSDNTTPSWEGVVVEANNSGGSRFLLQGQNNLSEQGYIWTTNSQGVITRGSGWKSGDALLQWEEEFDIDLNGDSI
IA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9057; Mature: 9057

Theoretical pI: Translated: 3.78; Mature: 3.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METRNYSDNTTPSWEGVVVEANNSGGSRFLLQGQNNLSEQGYIWTTNSQGVITRGSGWKS
CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEECCCCCEEECCCCCCC
GDALLQWEEEFDIDLNGDSIIA
CCEEEEECCCCCEEECCCEEEC
>Mature Secondary Structure
METRNYSDNTTPSWEGVVVEANNSGGSRFLLQGQNNLSEQGYIWTTNSQGVITRGSGWKS
CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEECCCCCEEECCCCCCC
GDALLQWEEEFDIDLNGDSIIA
CCEEEEECCCCCEEECCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA