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The map label for this gene is 113476955

Identifier: 113476955

GI number: 113476955

Start: 5275996

End: 5276295

Strand: Reverse

Name: 113476955

Synonym: Tery_3451

Alternate gene names: NA

Gene position: 5276295-5275996 (Counterclockwise)

Preceding gene: 113476957

Following gene: 113476954

Centisome position: 68.08

GC content: 38.67

Gene sequence:

>300_bases
TTGTCCAAATTCATATTAAAAGTAGTTTGGTTAGACGATAATGTAGCACTTGCTGTAGATCAAGTGGTAGGAAATGGTAC
GAGTCCTCTAACTTGTTACTTTTTCTGGCCTCGGAATGATGCTTGGGAGCAACTCAAAAAAGAATTAGAAGGTAAACATT
GGATTTCAGAAGCAGATCGGGTGGCTCTTTTGAATAAGGCCACTGAAATAATTAGCTATTGGCAAGAAGAGGGAAGAAGA
AGGCCCTTCTTAGAAGCTCAGGCAAAGTTTCCAGAAATAGTTTTTACAGGTACTAATTAG

Upstream 100 bases:

>100_bases
CGAAAACTAAAATTGCTTTATTCATCATCAAATTTCTATGGTAAAATAAAATTTTATGTGTAAAGTTTTAAATTTAGCCT
AAAATTGGCCAGGAGGTAAA

Downstream 100 bases:

>100_bases
TAATAGTAAGTCAAAAATTAAAAAATAAAAGTCAAAAATTAAAAGTCAAAAATTAAAAGTTAAAAGTTAAAAGTTAACTA
AGAATCAAGATCGATAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Ycf65-like protein

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MSKFILKVVWLDDNVALAVDQVVGNGTSPLTCYFFWPRNDAWEQLKKELEGKHWISEADRVALLNKATEIISYWQEEGRR
RPFLEAQAKFPEIVFTGTN

Sequences:

>Translated_99_residues
MSKFILKVVWLDDNVALAVDQVVGNGTSPLTCYFFWPRNDAWEQLKKELEGKHWISEADRVALLNKATEIISYWQEEGRR
RPFLEAQAKFPEIVFTGTN
>Mature_98_residues
SKFILKVVWLDDNVALAVDQVVGNGTSPLTCYFFWPRNDAWEQLKKELEGKHWISEADRVALLNKATEIISYWQEEGRRR
PFLEAQAKFPEIVFTGTN

Specific function: Probably a ribosomal protein or a ribosome-associated protein

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PSRP3/ycf65 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RRP3_TRIEI (Q10YY1)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_723016.1
- STRING:   Q10YY1
- GeneID:   4243395
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_3451
- NMPDR:   fig|203124.1.peg.4236
- eggNOG:   NOG28579
- HOGENOM:   HBG635073
- OMA:   WPRNDAW
- ProtClustDB:   PRK02724
- BioCyc:   TERY203124:TERY_3451-MONOMER
- GO:   GO:0009536
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00619
- InterPro:   IPR006924
- ProDom:   PD015453

Pfam domain/function: PF04839 PSRP-3_Ycf65

EC number: NA

Molecular weight: Translated: 11502; Mature: 11371

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFILKVVWLDDNVALAVDQVVGNGTSPLTCYFFWPRNDAWEQLKKELEGKHWISEADR
CCCEEEEEEEECCCCEEEEEHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCHH
VALLNKATEIISYWQEEGRRRPFLEAQAKFPEIVFTGTN
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure 
SKFILKVVWLDDNVALAVDQVVGNGTSPLTCYFFWPRNDAWEQLKKELEGKHWISEADR
CCEEEEEEEECCCCEEEEEHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCHH
VALLNKATEIISYWQEEGRRRPFLEAQAKFPEIVFTGTN
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA