Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
---|---|
Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is yiiD [H]
Identifier: 113476598
GI number: 113476598
Start: 4685893
End: 4686351
Strand: Reverse
Name: yiiD [H]
Synonym: Tery_3035
Alternate gene names: 113476598
Gene position: 4686351-4685893 (Counterclockwise)
Preceding gene: 113476599
Following gene: 113476592
Centisome position: 60.47
GC content: 30.94
Gene sequence:
>459_bases ATGTTAAAGTTTAAGATTAGCCGAATTCAAAACAAACAAGAAAAAGAAAATATGTATTATCAACGTTGGGTAGTTTTAAG AAAACCGATAGATATGGAAAGAGGAACAGAAAAAGATGAGTCTGACGATGATGATTCTTCTCTACATTTTATTGCTGTTT ATGAGGAACAAATTATTGGTTCGGCTAGACTGCGACAATTATCTACAGAACTAGGAAGTATTTCATATGTTGCTGTTTTA CCTAAATTTCAATCTCAGGGAGTAGGCACAGCTTTAATTCAAAAAATCATTGAAATTGCCAAAGAAAAACAATTAAAATC TTTGAGAGTAATGTCTCGTTTGAGTGCATCTAAGTTTTATGAAAAAATAGGTTTTATAAGCACTGGTCAACAACTTAATT TTTTAGGAATACCGCACCAATTTATGCTCTTTAATTTACCTGATGTTCAGAATTTATAG
Upstream 100 bases:
>100_bases CAGTGATTGCTTTATTAGTTATCAAATTGTATTTAGCAACCCATAAATAAAAATCTAGATTAAATCAAATAGAGATCCTT GAATTAATTAAAATTGAAAA
Downstream 100 bases:
>100_bases ATTTATCTTTAATAAAAAAAATCTTCAATTTGCCTAATCAAACAACTAATATATTTTAAATTTATACACCACTTCTTATT GTTATGAGTTACAATAACAG
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MLKFKISRIQNKQEKENMYYQRWVVLRKPIDMERGTEKDESDDDDSSLHFIAVYEEQIIGSARLRQLSTELGSISYVAVL PKFQSQGVGTALIQKIIEIAKEKQLKSLRVMSRLSASKFYEKIGFISTGQQLNFLGIPHQFMLFNLPDVQNL
Sequences:
>Translated_152_residues MLKFKISRIQNKQEKENMYYQRWVVLRKPIDMERGTEKDESDDDDSSLHFIAVYEEQIIGSARLRQLSTELGSISYVAVL PKFQSQGVGTALIQKIIEIAKEKQLKSLRVMSRLSASKFYEKIGFISTGQQLNFLGIPHQFMLFNLPDVQNL >Mature_152_residues MLKFKISRIQNKQEKENMYYQRWVVLRKPIDMERGTEKDESDDDDSSLHFIAVYEEQIIGSARLRQLSTELGSISYVAVL PKFQSQGVGTALIQKIIEIAKEKQLKSLRVMSRLSASKFYEKIGFISTGQQLNFLGIPHQFMLFNLPDVQNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1790321, Length=126, Percent_Identity=30.952380952381, Blast_Score=70, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR012660 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF09500 YiiD_Cterm [H]
EC number: NA
Molecular weight: Translated: 17589; Mature: 17589
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKFKISRIQNKQEKENMYYQRWVVLRKPIDMERGTEKDESDDDDSSLHFIAVYEEQIIG CCEEEHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHH SARLRQLSTELGSISYVAVLPKFQSQGVGTALIQKIIEIAKEKQLKSLRVMSRLSASKFY HHHHHHHHHHHCCEEEEEEECCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKIGFISTGQQLNFLGIPHQFMLFNLPDVQNL HHHCCCCCCCEEEEECCCCHHEEECCCCCCCC >Mature Secondary Structure MLKFKISRIQNKQEKENMYYQRWVVLRKPIDMERGTEKDESDDDDSSLHFIAVYEEQIIG CCEEEHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHH SARLRQLSTELGSISYVAVLPKFQSQGVGTALIQKIIEIAKEKQLKSLRVMSRLSASKFY HHHHHHHHHHHCCEEEEEEECCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKIGFISTGQQLNFLGIPHQFMLFNLPDVQNL HHHCCCCCCCEEEEECCCCHHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]