Click here to switch to the map view.

The map label for this gene is 113476586

Identifier: 113476586

GI number: 113476586

Start: 4670397

End: 4671083

Strand: Reverse

Name: 113476586

Synonym: Tery_3019

Alternate gene names: NA

Gene position: 4671083-4670397 (Counterclockwise)

Preceding gene: 113476589

Following gene: 113476585

Centisome position: 60.27

GC content: 32.75

Gene sequence:

>687_bases
TTGAAATTTGGCTATGGTAACAATACATCATTCTTAAATCAACTAGAGAAAAGAAGTTTAACTTATATAGGAGGATTAGC
TAAAAATCGAAAAGTCATCATTAAAAAACAAGATGACATTAAAGAGGAAATTAGATTAGACAAGCTGGCAGAAAGTATAC
CTCAGAAAGCTTTCAACTTAGTTCAACTAAGTACAAAAAATGCTAGAGAAGTTTGGGTAGCTACATTAGAAGTAGAAATA
TCTAGGATGTCAGGTCAAAAAACTATAGCTATCGTTATGAATGCTAAAAGTTTTTCTGAGGCCACTGATATTAACTATTA
TATCACTAATAGAGAAGACAAATATGTAACTCCTGAGTGGATATATTCTACTTATTCTCAAAGAAATTGGGTGGAAGTTT
TCTACAGGGAAGCCAAAGGATGGTTAGGATTAAGAGAATATCAAGTCAGAGATAAAATCAGCCTTAAAAGGCATTTTATT
TTAGTATTTTGTGCTTATACATTTATTATCTGGCATCAGTTAACAGGAGGTATAAGAAGGCGTTGGGCTAACAAACCATT
AAATACGTTTACTGATACTTTAGAAGCATTTCGTACCGCAATATCTTATCGTTTTGTTGAGTGGTTAGATGAAAACATCG
ACGTATTTACCGCTCATAAAGAGAGTTTAGGGTTTGTTTGGGCTTGA

Upstream 100 bases:

>100_bases
AAGGAAAAAAAGACCCAGAATTTGTCAAGAAACCAGACGAGTGCAATGTCTCTAGTAGATCAATGTTTGTCCAGAGGACA
CCAACCAGAAATTGTGTTAA

Downstream 100 bases:

>100_bases
AATTTGCTAAAGTCCCGATACTAGCGATCGCTCTGTAGCTAAGTAGGAAATTTGGGAAGCAAGTTTGAGCTATCTATTTA
TTATTTTTTTTTTGAGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKFGYGNNTSFLNQLEKRSLTYIGGLAKNRKVIIKKQDDIKEEIRLDKLAESIPQKAFNLVQLSTKNAREVWVATLEVEI
SRMSGQKTIAIVMNAKSFSEATDINYYITNREDKYVTPEWIYSTYSQRNWVEVFYREAKGWLGLREYQVRDKISLKRHFI
LVFCAYTFIIWHQLTGGIRRRWANKPLNTFTDTLEAFRTAISYRFVEWLDENIDVFTAHKESLGFVWA

Sequences:

>Translated_228_residues
MKFGYGNNTSFLNQLEKRSLTYIGGLAKNRKVIIKKQDDIKEEIRLDKLAESIPQKAFNLVQLSTKNAREVWVATLEVEI
SRMSGQKTIAIVMNAKSFSEATDINYYITNREDKYVTPEWIYSTYSQRNWVEVFYREAKGWLGLREYQVRDKISLKRHFI
LVFCAYTFIIWHQLTGGIRRRWANKPLNTFTDTLEAFRTAISYRFVEWLDENIDVFTAHKESLGFVWA
>Mature_228_residues
MKFGYGNNTSFLNQLEKRSLTYIGGLAKNRKVIIKKQDDIKEEIRLDKLAESIPQKAFNLVQLSTKNAREVWVATLEVEI
SRMSGQKTIAIVMNAKSFSEATDINYYITNREDKYVTPEWIYSTYSQRNWVEVFYREAKGWLGLREYQVRDKISLKRHFI
LVFCAYTFIIWHQLTGGIRRRWANKPLNTFTDTLEAFRTAISYRFVEWLDENIDVFTAHKESLGFVWA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26922; Mature: 26922

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFGYGNNTSFLNQLEKRSLTYIGGLAKNRKVIIKKQDDIKEEIRLDKLAESIPQKAFNL
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
VQLSTKNAREVWVATLEVEISRMSGQKTIAIVMNAKSFSEATDINYYITNREDKYVTPEW
HEECCCCCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCHHH
IYSTYSQRNWVEVFYREAKGWLGLREYQVRDKISLKRHFILVFCAYTFIIWHQLTGGIRR
HHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWANKPLNTFTDTLEAFRTAISYRFVEWLDENIDVFTAHKESLGFVWA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MKFGYGNNTSFLNQLEKRSLTYIGGLAKNRKVIIKKQDDIKEEIRLDKLAESIPQKAFNL
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
VQLSTKNAREVWVATLEVEISRMSGQKTIAIVMNAKSFSEATDINYYITNREDKYVTPEW
HEECCCCCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCHHH
IYSTYSQRNWVEVFYREAKGWLGLREYQVRDKISLKRHFILVFCAYTFIIWHQLTGGIRR
HHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWANKPLNTFTDTLEAFRTAISYRFVEWLDENIDVFTAHKESLGFVWA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA