| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476529
Identifier: 113476529
GI number: 113476529
Start: 4592699
End: 4593613
Strand: Reverse
Name: 113476529
Synonym: Tery_2956
Alternate gene names: NA
Gene position: 4593613-4592699 (Counterclockwise)
Preceding gene: 113476530
Following gene: 113476528
Centisome position: 59.27
GC content: 34.97
Gene sequence:
>915_bases ATGACTACTACTCTCAAATATCAACAAAATTTAGCGACAAAGTTAGTCAATGGAATTCTCTCAATTAAGCCACTTGCTAA TTTTGCGAAAACTCAAGCAAGAAAAATGATTATTAAACGTGCAGAAAAAATTGGTATCCCTTGGCGTCAACAAGTAAAAG AACTTTCAAAACATAATTGGGATAGAGAATGGAAGGTAGTAAATAACCCTAATTTAGGATATCCCAAATATTATCTTACT TCATTTCATGCTTATGAAAAAGGTAATATGAGTTGGCAAGCAGCTACGGAGGTAGAAGTCGCATCATTGGCAGTTCATGC AGGTATTTGGCCGGAAGAAGGTATTGGTGGAGATGCTAGACTTCGTCAAAGTTTTCTTGATATTTTAAAAGCGGAAATTT CTACGCCAAAAGATGTTTTAGATTTAGGATGTAGCGTGGGCTTAAATACTTTTCCTCTGCAAAAACTTTTTCCTGAAGCT CAATTTACAGGAGTAGATTTATCACCTTATTTTTTGGCAGTTGCTTTGTATCGTTCTCAACAACAAAATTTGGATATTAA TTGGGTTCATGCTGCAGCTGAAGCAACTGGTTTACCTGATGATTCTTTTGATTTGATTTCTATCTTTTTGGTGTGCCATG AATTACCACAATTTGCTACTAGAAAAATATTTCGGGAGGCAAGGCGATTATTACGCTCAAATGGTACTATTGCTATTATG GATATGAATCCTAAGTCGGAAGTTTATACTACCATGGATCCTCATATTTTTACTTTGTTGAAGAGTACTGAACCTTATTT GGATGAATATTTTACTTTGGATATTGAAAGGGAATTAGTTGATGCTGGTTTTGAACCTCCAAAAATAATCTGTAATACTC ACCGTCACCGCACTATTATTGCCATAGTTGTTTGA
Upstream 100 bases:
>100_bases AATCTAGATAGTAGAATAAATCTATTAATCAATCAATTTAATTTTTCGATTCACAGCAGAAATATAACTAATTTTTAACA CATTTTTTGTAGGATAAAAA
Downstream 100 bases:
>100_bases TTATTAAGGTTGTAATTTTTATTGTTAATTTTGAAAAATAAAAATTAGATCAAGTTGGGTGAAGTTTTATATCGTTCTAT TCTTAATGACTAGGGTTTTT
Product: type 11 methyltransferase
Products: NA
Alternate protein names: Methyltransferase Domain Family; SAM-Dependent Methyltransferase; UbiE/COQ5 Family Methlytransferase; Methyltransferase; Methyltransferase UbiE/COQ5 Family; UbiE/COQ5 Methyltransferase
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MTTTLKYQQNLATKLVNGILSIKPLANFAKTQARKMIIKRAEKIGIPWRQQVKELSKHNWDREWKVVNNPNLGYPKYYLT SFHAYEKGNMSWQAATEVEVASLAVHAGIWPEEGIGGDARLRQSFLDILKAEISTPKDVLDLGCSVGLNTFPLQKLFPEA QFTGVDLSPYFLAVALYRSQQQNLDINWVHAAAEATGLPDDSFDLISIFLVCHELPQFATRKIFREARRLLRSNGTIAIM DMNPKSEVYTTMDPHIFTLLKSTEPYLDEYFTLDIERELVDAGFEPPKIICNTHRHRTIIAIVV
Sequences:
>Translated_304_residues MTTTLKYQQNLATKLVNGILSIKPLANFAKTQARKMIIKRAEKIGIPWRQQVKELSKHNWDREWKVVNNPNLGYPKYYLT SFHAYEKGNMSWQAATEVEVASLAVHAGIWPEEGIGGDARLRQSFLDILKAEISTPKDVLDLGCSVGLNTFPLQKLFPEA QFTGVDLSPYFLAVALYRSQQQNLDINWVHAAAEATGLPDDSFDLISIFLVCHELPQFATRKIFREARRLLRSNGTIAIM DMNPKSEVYTTMDPHIFTLLKSTEPYLDEYFTLDIERELVDAGFEPPKIICNTHRHRTIIAIVV >Mature_303_residues TTTLKYQQNLATKLVNGILSIKPLANFAKTQARKMIIKRAEKIGIPWRQQVKELSKHNWDREWKVVNNPNLGYPKYYLTS FHAYEKGNMSWQAATEVEVASLAVHAGIWPEEGIGGDARLRQSFLDILKAEISTPKDVLDLGCSVGLNTFPLQKLFPEAQ FTGVDLSPYFLAVALYRSQQQNLDINWVHAAAEATGLPDDSFDLISIFLVCHELPQFATRKIFREARRLLRSNGTIAIMD MNPKSEVYTTMDPHIFTLLKSTEPYLDEYFTLDIERELVDAGFEPPKIICNTHRHRTIIAIVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34609; Mature: 34478
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTLKYQQNLATKLVNGILSIKPLANFAKTQARKMIIKRAEKIGIPWRQQVKELSKHNW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC DREWKVVNNPNLGYPKYYLTSFHAYEKGNMSWQAATEVEVASLAVHAGIWPEEGIGGDAR CCCEEEECCCCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCHHH LRQSFLDILKAEISTPKDVLDLGCSVGLNTFPLQKLFPEAQFTGVDLSPYFLAVALYRSQ HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHH QQNLDINWVHAAAEATGLPDDSFDLISIFLVCHELPQFATRKIFREARRLLRSNGTIAIM HCCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE DMNPKSEVYTTMDPHIFTLLKSTEPYLDEYFTLDIERELVDAGFEPPKIICNTHRHRTII ECCCCCCEEECCCCHHHHHHHCCCCHHHHHEEEEHHHHHHHCCCCCCCEEECCCCCEEEE AIVV EEEC >Mature Secondary Structure TTTLKYQQNLATKLVNGILSIKPLANFAKTQARKMIIKRAEKIGIPWRQQVKELSKHNW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC DREWKVVNNPNLGYPKYYLTSFHAYEKGNMSWQAATEVEVASLAVHAGIWPEEGIGGDAR CCCEEEECCCCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCHHH LRQSFLDILKAEISTPKDVLDLGCSVGLNTFPLQKLFPEAQFTGVDLSPYFLAVALYRSQ HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHH QQNLDINWVHAAAEATGLPDDSFDLISIFLVCHELPQFATRKIFREARRLLRSNGTIAIM HCCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE DMNPKSEVYTTMDPHIFTLLKSTEPYLDEYFTLDIERELVDAGFEPPKIICNTHRHRTII ECCCCCCEEECCCCHHHHHHHCCCCHHHHHEEEEHHHHHHHCCCCCCCEEECCCCCEEEE AIVV EEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA