Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476450

Identifier: 113476450

GI number: 113476450

Start: 4468895

End: 4469809

Strand: Reverse

Name: 113476450

Synonym: Tery_2865

Alternate gene names: NA

Gene position: 4469809-4468895 (Counterclockwise)

Preceding gene: 113476451

Following gene: 113476448

Centisome position: 57.67

GC content: 39.23

Gene sequence:

>915_bases
ATGTATATGGAAACTAAATCTTCTACTATAGTGCCTACCCAAGATAATATTGATTCTGCAGAGTTGTCTGAAAATAGAAG
AGATTTTCTAGTCAAGTTCTGGGGAGTTCGGGGTAGTGTTCCGACTCCTGGAAAAGATACTGTTCGATATGGAGGAAATA
CTTCCTGCATAGAAATGCAAATTGCTAATAATCGTTTGATATTTGATGGAGGTACTGGAATACGAGAATTAGGGAAAGAA
CTGATGCAGGAAATGCCAATTGAAGCTTATGTCTTTTTTACTCATTATCATTGGGATCACATTCAAGGTTTCCCATTGTT
CACTCCGGCTTTTACTAGAGGAAATTGTTTTCACATCTATGGGGCAATTCCTCCTAAAGGGGAGTCAATGAAAAAGCATT
TTATGGATAGAGTTTTACATAATAACTCTCCTATTCCTCTCAAGGATATGCAGGCGGACTTGCGATTTTATGAACTTGAG
CATGGGCAAAAAATGATGCTCCATAATATAGAGATTGAAACGGGTTCTCTGAATCATCCTAATAAGGCGATAGGATACAG
GGTGACATGGAATGGAAGGAGTGCGGTTTATTGTTCTGATACAGAGCATTTTCCTGAAGGTTTGGATGAAAACGTAGTCT
ATTTAGCTCGAGGTGCTGATGTTCTAATTTATGATGCTATGTACACTGATGATGAGTATCATAACCCCAAGTCCTCTAAA
GTGGGTTGGGGACATTCTACTTGGCAGGAAGCAATCAAAGTTGCTAAAGCTGCCGGAGTAAAGCAACTAGTAATTTTTCA
CCATGAACCAGGTCATAGTGATGATTTTCTGGATGGGATGGCAGAAAAAGTTAAAGCAGCTTTTCCTATGGCAGTTATGG
CCATAGAAGGTTTAGTGCTACCAGTAGGAATTTGA

Upstream 100 bases:

>100_bases
TTACCTAGGGCTGTACCTATGGTAGAAGCAATGGTAGCTATAGTTCTATGTGATCATTTATTGCGTCATTATGGACAATG
TAATACCTTAAAGTCAGAAA

Downstream 100 bases:

>100_bases
TATGAGAAATTACTTTAATACAAATTTAATAATTTATTGCGATATTCTTTGCTTATCGGATGATTATCTCCTAAGATGTG
AAATATTGCTAGCATTGCTT

Product: beta-lactamase-like protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metal-Dependent Hydrolase; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Superfamily Hydrolase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Metal Dependant Beta Lactamase Protein; Metallo-Beta-Lactamase Superfamily; Phytochrome Sensor Protein; Metal-Dependent Hydrolase Of Beta-Lactamase Superfamily I; Metallo-Beta-Lactamase; GAF Domain/HD Domain Protein; Seceted Metal-Dependent Hydrolase; Beta-Lactamase Family Hydrolase; Conserved Beta-Lactamase Domain Protein; RNAse Z; Sulphohydrolase/Glycosulfatase Zn-Dependent Hydrolase

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MYMETKSSTIVPTQDNIDSAELSENRRDFLVKFWGVRGSVPTPGKDTVRYGGNTSCIEMQIANNRLIFDGGTGIRELGKE
LMQEMPIEAYVFFTHYHWDHIQGFPLFTPAFTRGNCFHIYGAIPPKGESMKKHFMDRVLHNNSPIPLKDMQADLRFYELE
HGQKMMLHNIEIETGSLNHPNKAIGYRVTWNGRSAVYCSDTEHFPEGLDENVVYLARGADVLIYDAMYTDDEYHNPKSSK
VGWGHSTWQEAIKVAKAAGVKQLVIFHHEPGHSDDFLDGMAEKVKAAFPMAVMAIEGLVLPVGI

Sequences:

>Translated_304_residues
MYMETKSSTIVPTQDNIDSAELSENRRDFLVKFWGVRGSVPTPGKDTVRYGGNTSCIEMQIANNRLIFDGGTGIRELGKE
LMQEMPIEAYVFFTHYHWDHIQGFPLFTPAFTRGNCFHIYGAIPPKGESMKKHFMDRVLHNNSPIPLKDMQADLRFYELE
HGQKMMLHNIEIETGSLNHPNKAIGYRVTWNGRSAVYCSDTEHFPEGLDENVVYLARGADVLIYDAMYTDDEYHNPKSSK
VGWGHSTWQEAIKVAKAAGVKQLVIFHHEPGHSDDFLDGMAEKVKAAFPMAVMAIEGLVLPVGI
>Mature_304_residues
MYMETKSSTIVPTQDNIDSAELSENRRDFLVKFWGVRGSVPTPGKDTVRYGGNTSCIEMQIANNRLIFDGGTGIRELGKE
LMQEMPIEAYVFFTHYHWDHIQGFPLFTPAFTRGNCFHIYGAIPPKGESMKKHFMDRVLHNNSPIPLKDMQADLRFYELE
HGQKMMLHNIEIETGSLNHPNKAIGYRVTWNGRSAVYCSDTEHFPEGLDENVVYLARGADVLIYDAMYTDDEYHNPKSSK
VGWGHSTWQEAIKVAKAAGVKQLVIFHHEPGHSDDFLDGMAEKVKAAFPMAVMAIEGLVLPVGI

Specific function: Unknown

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34341; Mature: 34341

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMETKSSTIVPTQDNIDSAELSENRRDFLVKFWGVRGSVPTPGKDTVRYGGNTSCIEMQ
CCEECCCCEEECCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEECCCCEEEEEE
IANNRLIFDGGTGIRELGKELMQEMPIEAYVFFTHYHWDHIQGFPLFTPAFTRGNCFHIY
EECCEEEEECCCCHHHHHHHHHHHCCCEEEEEEEEEEHHHCCCCCCCCCCCCCCCEEEEE
GAIPPKGESMKKHFMDRVLHNNSPIPLKDMQADLRFYELEHGQKMMLHNIEIETGSLNHP
ECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCCCEEEEEEEEEECCCCCCC
NKAIGYRVTWNGRSAVYCSDTEHFPEGLDENVVYLARGADVLIYDAMYTDDEYHNPKSSK
CCCEEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCC
VGWGHSTWQEAIKVAKAAGVKQLVIFHHEPGHSDDFLDGMAEKVKAAFPMAVMAIEGLVL
CCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHCCEEE
PVGI
ECCC
>Mature Secondary Structure
MYMETKSSTIVPTQDNIDSAELSENRRDFLVKFWGVRGSVPTPGKDTVRYGGNTSCIEMQ
CCEECCCCEEECCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEECCCCEEEEEE
IANNRLIFDGGTGIRELGKELMQEMPIEAYVFFTHYHWDHIQGFPLFTPAFTRGNCFHIY
EECCEEEEECCCCHHHHHHHHHHHCCCEEEEEEEEEEHHHCCCCCCCCCCCCCCCEEEEE
GAIPPKGESMKKHFMDRVLHNNSPIPLKDMQADLRFYELEHGQKMMLHNIEIETGSLNHP
ECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCCCEEEEEEEEEECCCCCCC
NKAIGYRVTWNGRSAVYCSDTEHFPEGLDENVVYLARGADVLIYDAMYTDDEYHNPKSSK
CCCEEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCC
VGWGHSTWQEAIKVAKAAGVKQLVIFHHEPGHSDDFLDGMAEKVKAAFPMAVMAIEGLVL
CCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHCCEEE
PVGI
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA