Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476363

Identifier: 113476363

GI number: 113476363

Start: 4289908

End: 4291026

Strand: Reverse

Name: 113476363

Synonym: Tery_2768

Alternate gene names: NA

Gene position: 4291026-4289908 (Counterclockwise)

Preceding gene: 113476364

Following gene: 113476362

Centisome position: 55.37

GC content: 31.9

Gene sequence:

>1119_bases
ATGAGTGGGCTACCAGGAGAACTTTATAAAGAATGCAGGGATGTTCTTTTAGAATGCGACATTTTTACCAATTTTCAATA
CTTGCGTAGTTTTTGCGGGGCAATTAAGGAATTAAATGTGGTATCAAATAAACTGAAAGAAGCTAATACACCAGGGTTAT
TAGTGATGTTAAATCTGGATATTTTAATAAAAACAAGACATCAAGAATATGGGTGTATATTTATAATTTTTTTGGAAAAT
TTGAGAGATGAATACTATGAAGAAGACGAGATGTGGCATAGAATTAATAATTTATGGAACAAGGTTAAAAAAGAATTAGA
AAATCCATCTTTACCCTTAAATTCATCAACATCTTTAGGCAATAATAATAACAGCCAGTTGTTTCAATCAATAATTGATA
TTGATTTTTCAGAACAAGAAGATACTGTTAGAAAAGCTATAAAATGCCAAAAATCACACAAACGAACGGGAGCTTTTCTG
ATTGATGGGTATGATGAAAATTGTGGTCAGAAAGCTCTGCTTACTAGGCTATTACGTAAATTGCCAGAATTAAGTAATGG
ACGTAAAATCCAAAGGGATTTAACTCGGATGAGCGATATTAGGGAATTATGGGGAAAAATTTCTTCTGAATTTTTTGGTT
CAAATACTACAGACGAACAGGTTATTAATGCAATTTTACAATGTTTAGAAACTCAAAATTTAATTTTTATTTTTTCAGGA
CTCCACCGTACTTTTACAGGTTTTTTACCAGATTTAATTAAAAAATTTTGGTGGCCAATAGTCGAAAAAGCTACTCACCA
AAAAACTTATTTATTAATGTTTTTGGTTGATGATAAAGGAATAGTTTGTAAATCAGGAGTTTCCCTAACTTGGAAGTTTG
AAAATTCAAAATATCCTAAGGACCCTTTATGCTTACCTGAAACTGGTAAATTTTCATACTATCATTTAGAAACATGGAAA
AATAGTGTTGTACGAAAAAATATGGTACCTGAGAGTATATCTGTTGATGAATTACTCCAAAAATCTCAAGGAGGTGTTCC
TGAGCTGGTTTATAGACAAATTTGTGATTACTGTGGCCGTAGTTGGGAAGGAGGGTTGGCCAAATGGTTGATTCAGTGA

Upstream 100 bases:

>100_bases
ATCAAGATGGTTTTTAACTGGGTTTGCCAAAAAAATGCTATAGGTGTAGATTTCTATTATTATATATTAATAGTGTAATA
CAATCTTTATAAAAAATTGT

Downstream 100 bases:

>100_bases
TTCCTCGCCTCTATACGGGGGAAAGACAACCTTCGGAACAGGAGTGCGAACTGCATGGACTTGAACCTTATATACCTTCA
CCAGAGTTGGTTGAGGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MSGLPGELYKECRDVLLECDIFTNFQYLRSFCGAIKELNVVSNKLKEANTPGLLVMLNLDILIKTRHQEYGCIFIIFLEN
LRDEYYEEDEMWHRINNLWNKVKKELENPSLPLNSSTSLGNNNNSQLFQSIIDIDFSEQEDTVRKAIKCQKSHKRTGAFL
IDGYDENCGQKALLTRLLRKLPELSNGRKIQRDLTRMSDIRELWGKISSEFFGSNTTDEQVINAILQCLETQNLIFIFSG
LHRTFTGFLPDLIKKFWWPIVEKATHQKTYLLMFLVDDKGIVCKSGVSLTWKFENSKYPKDPLCLPETGKFSYYHLETWK
NSVVRKNMVPESISVDELLQKSQGGVPELVYRQICDYCGRSWEGGLAKWLIQ

Sequences:

>Translated_372_residues
MSGLPGELYKECRDVLLECDIFTNFQYLRSFCGAIKELNVVSNKLKEANTPGLLVMLNLDILIKTRHQEYGCIFIIFLEN
LRDEYYEEDEMWHRINNLWNKVKKELENPSLPLNSSTSLGNNNNSQLFQSIIDIDFSEQEDTVRKAIKCQKSHKRTGAFL
IDGYDENCGQKALLTRLLRKLPELSNGRKIQRDLTRMSDIRELWGKISSEFFGSNTTDEQVINAILQCLETQNLIFIFSG
LHRTFTGFLPDLIKKFWWPIVEKATHQKTYLLMFLVDDKGIVCKSGVSLTWKFENSKYPKDPLCLPETGKFSYYHLETWK
NSVVRKNMVPESISVDELLQKSQGGVPELVYRQICDYCGRSWEGGLAKWLIQ
>Mature_371_residues
SGLPGELYKECRDVLLECDIFTNFQYLRSFCGAIKELNVVSNKLKEANTPGLLVMLNLDILIKTRHQEYGCIFIIFLENL
RDEYYEEDEMWHRINNLWNKVKKELENPSLPLNSSTSLGNNNNSQLFQSIIDIDFSEQEDTVRKAIKCQKSHKRTGAFLI
DGYDENCGQKALLTRLLRKLPELSNGRKIQRDLTRMSDIRELWGKISSEFFGSNTTDEQVINAILQCLETQNLIFIFSGL
HRTFTGFLPDLIKKFWWPIVEKATHQKTYLLMFLVDDKGIVCKSGVSLTWKFENSKYPKDPLCLPETGKFSYYHLETWKN
SVVRKNMVPESISVDELLQKSQGGVPELVYRQICDYCGRSWEGGLAKWLIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43171; Mature: 43040

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00268 CECROPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLPGELYKECRDVLLECDIFTNFQYLRSFCGAIKELNVVSNKLKEANTPGLLVMLNLD
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECE
ILIKTRHQEYGCIFIIFLENLRDEYYEEDEMWHRINNLWNKVKKELENPSLPLNSSTSLG
EEEEECCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NNNNSQLFQSIIDIDFSEQEDTVRKAIKCQKSHKRTGAFLIDGYDENCGQKALLTRLLRK
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
LPELSNGRKIQRDLTRMSDIRELWGKISSEFFGSNTTDEQVINAILQCLETQNLIFIFSG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEHH
LHRTFTGFLPDLIKKFWWPIVEKATHQKTYLLMFLVDDKGIVCKSGVSLTWKFENSKYPK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECCCEEEEEECCCCCCC
DPLCLPETGKFSYYHLETWKNSVVRKNMVPESISVDELLQKSQGGVPELVYRQICDYCGR
CCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCC
SWEGGLAKWLIQ
CCCCCHHHHHCC
>Mature Secondary Structure 
SGLPGELYKECRDVLLECDIFTNFQYLRSFCGAIKELNVVSNKLKEANTPGLLVMLNLD
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECE
ILIKTRHQEYGCIFIIFLENLRDEYYEEDEMWHRINNLWNKVKKELENPSLPLNSSTSLG
EEEEECCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NNNNSQLFQSIIDIDFSEQEDTVRKAIKCQKSHKRTGAFLIDGYDENCGQKALLTRLLRK
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
LPELSNGRKIQRDLTRMSDIRELWGKISSEFFGSNTTDEQVINAILQCLETQNLIFIFSG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEHH
LHRTFTGFLPDLIKKFWWPIVEKATHQKTYLLMFLVDDKGIVCKSGVSLTWKFENSKYPK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECCCEEEEEECCCCCCC
DPLCLPETGKFSYYHLETWKNSVVRKNMVPESISVDELLQKSQGGVPELVYRQICDYCGR
CCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCC
SWEGGLAKWLIQ
CCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA