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The map label for this gene is perM [C]

Identifier: 113476303

GI number: 113476303

Start: 4180082

End: 4181143

Strand: Reverse

Name: perM [C]

Synonym: Tery_2702

Alternate gene names: 113476303

Gene position: 4181143-4180082 (Counterclockwise)

Preceding gene: 113476304

Following gene: 113476301

Centisome position: 53.95

GC content: 32.86

Gene sequence:

>1062_bases
ATGCTGAAATTACTAAATCAAAGATTATTTTGGTACTTAGCATTACCAATAATTGTAATAAATGGTTGGGCTTTACTACA
AATATTTCAGTATTTTGGTCGGATAATTACAATAGCTGTTTCCGCAACATTACTATCATTTTTGTTAGATTACCCAGTAC
TTTTTTTGCAGAAACATGGAGGTAAAAGACACCGAGCAGTTATTTTAGTATTTTTAGTAGCATTAGTAATTATGTTAGTC
TTGGGAGTTATTCTGATTCCCCTGCTATTAGAACAACTGACCGGATTTATTGAAAAACTTCCTAGTTGGCTTGAATCAGG
AAATAAACAATTAGAATCATTTGACCAATGGGCATCTAAGTATCAACTGCCAATTAATTTAACAGTTATCACCAATAAAC
TTACAGAACGTTTATCTTCTCAATTGCAAGATATTACAGGAGAAATTATTAGTTTTGTCCTTAATATGGTAGGTAGAATT
TTTGATATTTTAATCACCATAGTTATTACTTTTTATCTAATGCTACATGGCGATCGCCTGTGGAATGGAATATTTAATTG
GTTACCTAATCACCTGGATATTCATGTACGGACATCATTAAAACAAAACTTTCAAAATTATTTTCTTGGCCAAGCAATGC
TAGCATGTTTGATGGGTGTTTCTATGACCTTAGGTTTATTATTTACAGGAACTCCTTTTGGCTTATTATTTGGCATAGGA
ATTGGCTTGATGACTTTAGTTCCTTTTGGTACTGCTTTGGGTGTAACTATCGTCAGTTTATTAATAACTTTAGAAAATTT
TTGGCTGGGAATAAAAGTTTTAATTGTGATAGTTTTAATCGAACAAGCAATTGAAAATTTTGTTGCCCCTAGAATATTAG
GAAGTTTTACAGGCCTCAATCCTGTCTGGATTGTACTGAGTTTATTAGTGGGGATGCAAGTATGGGGGGTGTTAGGTTTA
TTAATTGCTGTACCTGTGGCAGGATTTGTCAAAAATACTGTTAATTATCTCTTCAGTAAGTCCTATGGACAAGAAGCGAA
GTCAGAAATAATCCTTGACTGA

Upstream 100 bases:

>100_bases
TATAGTATTAACCATCTATAGTATTTTTTCTTTCCTATACGCTACTTAATATTCTTTATTCCTTAAAATTTAAAACTTGC
AGATATCATAAATATAAAAA

Downstream 100 bases:

>100_bases
GTTTGAGGGTTTATAAATGTGCTATAACGTCCATTCATCTCAATGAACCAAATAAAAAAATTATGACCTGCTCTGTGCCT
ACAGAATAGGAGTTTGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MLKLLNQRLFWYLALPIIVINGWALLQIFQYFGRIITIAVSATLLSFLLDYPVLFLQKHGGKRHRAVILVFLVALVIMLV
LGVILIPLLLEQLTGFIEKLPSWLESGNKQLESFDQWASKYQLPINLTVITNKLTERLSSQLQDITGEIISFVLNMVGRI
FDILITIVITFYLMLHGDRLWNGIFNWLPNHLDIHVRTSLKQNFQNYFLGQAMLACLMGVSMTLGLLFTGTPFGLLFGIG
IGLMTLVPFGTALGVTIVSLLITLENFWLGIKVLIVIVLIEQAIENFVAPRILGSFTGLNPVWIVLSLLVGMQVWGVLGL
LIAVPVAGFVKNTVNYLFSKSYGQEAKSEIILD

Sequences:

>Translated_353_residues
MLKLLNQRLFWYLALPIIVINGWALLQIFQYFGRIITIAVSATLLSFLLDYPVLFLQKHGGKRHRAVILVFLVALVIMLV
LGVILIPLLLEQLTGFIEKLPSWLESGNKQLESFDQWASKYQLPINLTVITNKLTERLSSQLQDITGEIISFVLNMVGRI
FDILITIVITFYLMLHGDRLWNGIFNWLPNHLDIHVRTSLKQNFQNYFLGQAMLACLMGVSMTLGLLFTGTPFGLLFGIG
IGLMTLVPFGTALGVTIVSLLITLENFWLGIKVLIVIVLIEQAIENFVAPRILGSFTGLNPVWIVLSLLVGMQVWGVLGL
LIAVPVAGFVKNTVNYLFSKSYGQEAKSEIILD
>Mature_353_residues
MLKLLNQRLFWYLALPIIVINGWALLQIFQYFGRIITIAVSATLLSFLLDYPVLFLQKHGGKRHRAVILVFLVALVIMLV
LGVILIPLLLEQLTGFIEKLPSWLESGNKQLESFDQWASKYQLPINLTVITNKLTERLSSQLQDITGEIISFVLNMVGRI
FDILITIVITFYLMLHGDRLWNGIFNWLPNHLDIHVRTSLKQNFQNYFLGQAMLACLMGVSMTLGLLFTGTPFGLLFGIG
IGLMTLVPFGTALGVTIVSLLITLENFWLGIKVLIVIVLIEQAIENFVAPRILGSFTGLNPVWIVLSLLVGMQVWGVLGL
LIAVPVAGFVKNTVNYLFSKSYGQEAKSEIILD

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=363, Percent_Identity=24.2424242424242, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003544
- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39545; Mature: 39545

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLLNQRLFWYLALPIIVINGWALLQIFQYFGRIITIAVSATLLSFLLDYPVLFLQKHG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GKRHRAVILVFLVALVIMLVLGVILIPLLLEQLTGFIEKLPSWLESGNKQLESFDQWASK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
YQLPINLTVITNKLTERLSSQLQDITGEIISFVLNMVGRIFDILITIVITFYLMLHGDRL
HCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WNGIFNWLPNHLDIHVRTSLKQNFQNYFLGQAMLACLMGVSMTLGLLFTGTPFGLLFGIG
HHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IGLMTLVPFGTALGVTIVSLLITLENFWLGIKVLIVIVLIEQAIENFVAPRILGSFTGLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PVWIVLSLLVGMQVWGVLGLLIAVPVAGFVKNTVNYLFSKSYGQEAKSEIILD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCC
>Mature Secondary Structure
MLKLLNQRLFWYLALPIIVINGWALLQIFQYFGRIITIAVSATLLSFLLDYPVLFLQKHG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GKRHRAVILVFLVALVIMLVLGVILIPLLLEQLTGFIEKLPSWLESGNKQLESFDQWASK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
YQLPINLTVITNKLTERLSSQLQDITGEIISFVLNMVGRIFDILITIVITFYLMLHGDRL
HCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WNGIFNWLPNHLDIHVRTSLKQNFQNYFLGQAMLACLMGVSMTLGLLFTGTPFGLLFGIG
HHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IGLMTLVPFGTALGVTIVSLLITLENFWLGIKVLIVIVLIEQAIENFVAPRILGSFTGLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PVWIVLSLLVGMQVWGVLGLLIAVPVAGFVKNTVNYLFSKSYGQEAKSEIILD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]