Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476278

Identifier: 113476278

GI number: 113476278

Start: 4143820

End: 4144854

Strand: Reverse

Name: 113476278

Synonym: Tery_2675

Alternate gene names: NA

Gene position: 4144854-4143820 (Counterclockwise)

Preceding gene: 113476279

Following gene: 113476277

Centisome position: 53.48

GC content: 34.01

Gene sequence:

>1035_bases
ATGACATCAAAACTGCCTATAATAATGATTGGTACACAAAGATCAGGCTCGAATTTATTGAGACTTATCTTAAATGAAAT
AAGTATCATTGCGGCACCTCATCCTCCTCATATAATACAAAGGTTAATGCCCCTACTCTTTACCTATGGTGATTTATCAG
TTAGTAAAAACTTTAAACAGCTTGTTAATGATACTTGTCAATTAATCAAATTAAACCCTGTTCCCTGGGAAAGGATCAAG
TTTGACCGAAATAATATTTTGTCTCGTTGTATGGAAAATACATTAGTTGCCGTTTTCTCAAGTGTTTATGATATTTATGC
TGAAGCTTGGGATGCCAAAATTTGGTGTTGCAAAAGCCTAGCTAATGTTCACTATTTTCCTCAAATCAATGCTTATCTTC
CTAATGCCAAATACTTATATCTTTACAGAGATGGCCGAGACGTAGCAGTTTCTTTCAAGGAAGCAGTAGTCGGACAAAAG
CATTTTTTTCATATTGCTCAACAGTGGAGAAAAGACCAACATGCAGCTTTAAAGATCAAAAAGCAACTTAGAGGTGAACA
ATTTTTTAGTTTGAGTTATGAAGATCTGATTAATTCGCCTGAACTAAGTCTATATAATTTATGTGGGTTTCTAGAGCTAG
AATTTAGCCCGACAATGTTGGATTTCTATAATTCAAGGGAAGCTAGTAATACATCATCATCTAGTACTCTATGGTCTAAT
GTATCTAAACCTATTATCAAGAAAAATTCTAATAAATTTCTGAGTAAAGCAACAAAAGAAGAAGTCAAAATTTTTGAAAG
TGTTGCAGGGGATGTTCTAGACTCTCTTGGATATGAGCGAAATCAAACAAATATGGGAGAATTTAGAACCTTTAGTCAGG
AAGAAATTGCCCAGTTTGATCTACAAAATGAAAAAGCTAAAGCTCAAGTCAGAGATATGATAGATGTCAAAGATAAAAAA
CGACGAGAACAACAATTATCTTTACTAGAGGCCATTAAATCTCGCTGCTCGCTGATCGATAGTAAAACCTATTAG

Upstream 100 bases:

>100_bases
TGGGATAATAGTTATTCGTGGGGATGATGTAGACAAAATAGGGAAGATTCGACGTTTTGAAGAATGATAGGATTATATCT
AGACTTATTGGTTTAAAAAT

Downstream 100 bases:

>100_bases
CTGGACTTTGAGATTTTTTACACCGAAAATGGCTCCAAACCCAGTCTTAGCAAGGGAAATACCTGAAAGAACTAAAAATA
GCTAAAAACGTAGGTATATC

Product: sulfotransferase

Products: NA

Alternate protein names: Sulfotransferase Domain-Containing Protein; Protein-Tyrosine Sulfotransferase; Sulfotransferase Domain Protein; Sulfotransferase Domain Superfamily

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTSKLPIIMIGTQRSGSNLLRLILNEISIIAAPHPPHIIQRLMPLLFTYGDLSVSKNFKQLVNDTCQLIKLNPVPWERIK
FDRNNILSRCMENTLVAVFSSVYDIYAEAWDAKIWCCKSLANVHYFPQINAYLPNAKYLYLYRDGRDVAVSFKEAVVGQK
HFFHIAQQWRKDQHAALKIKKQLRGEQFFSLSYEDLINSPELSLYNLCGFLELEFSPTMLDFYNSREASNTSSSSTLWSN
VSKPIIKKNSNKFLSKATKEEVKIFESVAGDVLDSLGYERNQTNMGEFRTFSQEEIAQFDLQNEKAKAQVRDMIDVKDKK
RREQQLSLLEAIKSRCSLIDSKTY

Sequences:

>Translated_344_residues
MTSKLPIIMIGTQRSGSNLLRLILNEISIIAAPHPPHIIQRLMPLLFTYGDLSVSKNFKQLVNDTCQLIKLNPVPWERIK
FDRNNILSRCMENTLVAVFSSVYDIYAEAWDAKIWCCKSLANVHYFPQINAYLPNAKYLYLYRDGRDVAVSFKEAVVGQK
HFFHIAQQWRKDQHAALKIKKQLRGEQFFSLSYEDLINSPELSLYNLCGFLELEFSPTMLDFYNSREASNTSSSSTLWSN
VSKPIIKKNSNKFLSKATKEEVKIFESVAGDVLDSLGYERNQTNMGEFRTFSQEEIAQFDLQNEKAKAQVRDMIDVKDKK
RREQQLSLLEAIKSRCSLIDSKTY
>Mature_343_residues
TSKLPIIMIGTQRSGSNLLRLILNEISIIAAPHPPHIIQRLMPLLFTYGDLSVSKNFKQLVNDTCQLIKLNPVPWERIKF
DRNNILSRCMENTLVAVFSSVYDIYAEAWDAKIWCCKSLANVHYFPQINAYLPNAKYLYLYRDGRDVAVSFKEAVVGQKH
FFHIAQQWRKDQHAALKIKKQLRGEQFFSLSYEDLINSPELSLYNLCGFLELEFSPTMLDFYNSREASNTSSSSTLWSNV
SKPIIKKNSNKFLSKATKEEVKIFESVAGDVLDSLGYERNQTNMGEFRTFSQEEIAQFDLQNEKAKAQVRDMIDVKDKKR
REQQLSLLEAIKSRCSLIDSKTY

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39711; Mature: 39580

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKLPIIMIGTQRSGSNLLRLILNEISIIAAPHPPHIIQRLMPLLFTYGDLSVSKNFKQ
CCCCCCEEEEECCCCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHH
LVNDTCQLIKLNPVPWERIKFDRNNILSRCMENTLVAVFSSVYDIYAEAWDAKIWCCKSL
HHHHHHHEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ANVHYFPQINAYLPNAKYLYLYRDGRDVAVSFKEAVVGQKHFFHIAQQWRKDQHAALKIK
HCCEECCCCCEECCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
KQLRGEQFFSLSYEDLINSPELSLYNLCGFLELEFSPTMLDFYNSREASNTSSSSTLWSN
HHHCCCCEEECCHHHHCCCCCCHHHHHHCEEEECCCCHHHHHHCCCCCCCCCCCHHHHHH
VSKPIIKKNSNKFLSKATKEEVKIFESVAGDVLDSLGYERNQTNMGEFRTFSQEEIAQFD
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHH
LQNEKAKAQVRDMIDVKDKKRREQQLSLLEAIKSRCSLIDSKTY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TSKLPIIMIGTQRSGSNLLRLILNEISIIAAPHPPHIIQRLMPLLFTYGDLSVSKNFKQ
CCCCCEEEEECCCCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHH
LVNDTCQLIKLNPVPWERIKFDRNNILSRCMENTLVAVFSSVYDIYAEAWDAKIWCCKSL
HHHHHHHEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ANVHYFPQINAYLPNAKYLYLYRDGRDVAVSFKEAVVGQKHFFHIAQQWRKDQHAALKIK
HCCEECCCCCEECCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
KQLRGEQFFSLSYEDLINSPELSLYNLCGFLELEFSPTMLDFYNSREASNTSSSSTLWSN
HHHCCCCEEECCHHHHCCCCCCHHHHHHCEEEECCCCHHHHHHCCCCCCCCCCCHHHHHH
VSKPIIKKNSNKFLSKATKEEVKIFESVAGDVLDSLGYERNQTNMGEFRTFSQEEIAQFD
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHH
LQNEKAKAQVRDMIDVKDKKRREQQLSLLEAIKSRCSLIDSKTY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA