| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113476226
Identifier: 113476226
GI number: 113476226
Start: 4045489
End: 4045770
Strand: Reverse
Name: 113476226
Synonym: Tery_2619
Alternate gene names: NA
Gene position: 4045770-4045489 (Counterclockwise)
Preceding gene: 113476227
Following gene: 113476220
Centisome position: 52.2
GC content: 35.11
Gene sequence:
>282_bases TTGATGATCAGTAAAATTAGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTT TGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG TTTTTGGTTTATTCTCTCCCTTCCCTTTTCCCCCTGAAACCCTTTTCCCTACTCATTCCATCCCCACGGGTATCCCGCGA TCAGTGAGGTATCAAAATCCTCAAATCAAGAAAACTCGTTAA
Upstream 100 bases:
>100_bases CCTTGGGCTGACTGGGAACTTCCCTCAAATTTGGTGGTGGAGGTGGCCAGACAGTTGGTTTTGGCTAATTGTTATGACCC GGAGGTGGCTATGCAATTTT
Downstream 100 bases:
>100_bases AAAAACAGAGATAATACTTTTTACCTTGACGGCTGAAACTGTTTTATGTTATACTCTACAAGTCTCTGCGCGAGAAAATA GTAATAGCAAAAATAATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MMISKISFWFLVFGFWFLVFGFWFLVFGFWFLVFGFWFLVFGFWFLVFGFWFLVFGLFSPFPFPPETLFPTHSIPTGIPR SVRYQNPQIKKTR
Sequences:
>Translated_93_residues MMISKISFWFLVFGFWFLVFGFWFLVFGFWFLVFGFWFLVFGFWFLVFGFWFLVFGLFSPFPFPPETLFPTHSIPTGIPR SVRYQNPQIKKTR >Mature_93_residues MMISKISFWFLVFGFWFLVFGFWFLVFGFWFLVFGFWFLVFGFWFLVFGFWFLVFGLFSPFPFPPETLFPTHSIPTGIPR SVRYQNPQIKKTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11367; Mature: 11367
Theoretical pI: Translated: 11.67; Mature: 11.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMISKISFWFLVFGFWFLVFGFWFLVFGFWFLVFGFWFLVFGFWFLVFGFWFLVFGLFSP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FPFPPETLFPTHSIPTGIPRSVRYQNPQIKKTR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMISKISFWFLVFGFWFLVFGFWFLVFGFWFLVFGFWFLVFGFWFLVFGFWFLVFGLFSP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FPFPPETLFPTHSIPTGIPRSVRYQNPQIKKTR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA