Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476096

Identifier: 113476096

GI number: 113476096

Start: 3808269

End: 3808577

Strand: Reverse

Name: 113476096

Synonym: Tery_2475

Alternate gene names: NA

Gene position: 3808577-3808269 (Counterclockwise)

Preceding gene: 113476097

Following gene: 113476095

Centisome position: 49.14

GC content: 38.51

Gene sequence:

>309_bases
ATGAATAATACAAAAAAATATCGGCTTAGTTGTACCCTTACCTTCGGTGATATTTATGGCCAAATTATTGTTTGGTTAAT
AGTAGTATTTTTGAGTATTGCTGGAGGGGTTGCTCTTTGGACTAGCAGCAGCCAAGCCTATGCTCTGGGGGCTATTGCTC
TAGTGGTAGTTCTATCTCTACCTTTTTTGCTATTTGCTTTTGTAACGACCCTATTAAATCATGTTGAACTTTCTGCAGTA
GAGCCTAATGAGGAAGAACAGCTTCAAATGCTAATACCTGGTCAGCAAACAGCTACATTTCTAGGTTAA

Upstream 100 bases:

>100_bases
TAATGTAAAGTATCGTAACAATTACGATAAAAGATATTAAGCAATCTTACCCTAGTTTAACAAGTAGTTTAACCTATAAA
TTAAAAAACGAGGTAAAGTG

Downstream 100 bases:

>100_bases
ATATTCGGAGTCTTTGGGATGGTGATAGTGAATAATTTTCTCAATTAATCAAGAATCTCAAAGTATTAAAAAAGCGGTTT
GCAATTAGTAGGATAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MNNTKKYRLSCTLTFGDIYGQIIVWLIVVFLSIAGGVALWTSSSQAYALGAIALVVVLSLPFLLFAFVTTLLNHVELSAV
EPNEEEQLQMLIPGQQTATFLG

Sequences:

>Translated_102_residues
MNNTKKYRLSCTLTFGDIYGQIIVWLIVVFLSIAGGVALWTSSSQAYALGAIALVVVLSLPFLLFAFVTTLLNHVELSAV
EPNEEEQLQMLIPGQQTATFLG
>Mature_102_residues
MNNTKKYRLSCTLTFGDIYGQIIVWLIVVFLSIAGGVALWTSSSQAYALGAIALVVVLSLPFLLFAFVTTLLNHVELSAV
EPNEEEQLQMLIPGQQTATFLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11120; Mature: 11120

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNTKKYRLSCTLTFGDIYGQIIVWLIVVFLSIAGGVALWTSSSQAYALGAIALVVVLSL
CCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHH
PFLLFAFVTTLLNHVELSAVEPNEEEQLQMLIPGQQTATFLG
HHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCCHHCCCC
>Mature Secondary Structure
MNNTKKYRLSCTLTFGDIYGQIIVWLIVVFLSIAGGVALWTSSSQAYALGAIALVVVLSL
CCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHH
PFLLFAFVTTLLNHVELSAVEPNEEEQLQMLIPGQQTATFLG
HHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA