Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476089

Identifier: 113476089

GI number: 113476089

Start: 3794910

End: 3795137

Strand: Reverse

Name: 113476089

Synonym: Tery_2466

Alternate gene names: NA

Gene position: 3795137-3794910 (Counterclockwise)

Preceding gene: 113476092

Following gene: 113476088

Centisome position: 48.97

GC content: 42.54

Gene sequence:

>228_bases
TTGACAGGAGCAGAAAGAGTAAAAGTAGAAAAATCTCGTGGCGATCGCTTGGCTCACATAGCAGAACCAGAACGCCAACA
GGCAGAGCCGGAACGCCAACGGGCAGAAAAAGCAGAACAAACACGAAGAAATGCTATTCCTAAATTATTAGCAACAGGAA
TAACTGTCGAACAAGTAGCACAAATTCTTAGTTTAACAGTTGAAGAAGTGAGGGAAATTTCTGGTTGA

Upstream 100 bases:

>100_bases
AACTGAGTCCCTAGGAATAGAACTGGGAATATGTCAGGGCTCCTATAAAAATCAAACTCTATCATGGTTACCTTGGTAGG
ACCCTGAACGGAACCTGTTA

Downstream 100 bases:

>100_bases
AAGTAAATATTATGACCATCCTGGCTCTATCTTTGATAAACCTGTGGGATGATATTAAGTTCAGTTTATTCTGTCATAGC
GATCGCTTCCACTAGAAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MTGAERVKVEKSRGDRLAHIAEPERQQAEPERQRAEKAEQTRRNAIPKLLATGITVEQVAQILSLTVEEVREISG

Sequences:

>Translated_75_residues
MTGAERVKVEKSRGDRLAHIAEPERQQAEPERQRAEKAEQTRRNAIPKLLATGITVEQVAQILSLTVEEVREISG
>Mature_74_residues
TGAERVKVEKSRGDRLAHIAEPERQQAEPERQRAEKAEQTRRNAIPKLLATGITVEQVAQILSLTVEEVREISG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8405; Mature: 8273

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGAERVKVEKSRGDRLAHIAEPERQQAEPERQRAEKAEQTRRNAIPKLLATGITVEQVA
CCCCHHHHHHHCCCCCCHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QILSLTVEEVREISG
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGAERVKVEKSRGDRLAHIAEPERQQAEPERQRAEKAEQTRRNAIPKLLATGITVEQVA
CCCHHHHHHHCCCCCCHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QILSLTVEEVREISG
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA