| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476084
Identifier: 113476084
GI number: 113476084
Start: 3786683
End: 3787084
Strand: Reverse
Name: 113476084
Synonym: Tery_2460
Alternate gene names: NA
Gene position: 3787084-3786683 (Counterclockwise)
Preceding gene: 113476086
Following gene: 113476083
Centisome position: 48.86
GC content: 37.06
Gene sequence:
>402_bases ATGGCCATAAATTGGAAAAGTTTCAGTGGCACTATTATTTTTTGTGCGATCGCGAACCTAACATCTATCCAGGTTGCTCA AGGAGAACATCTAGAAGATACTGCTGGTACATATCAACCTTTTGCAGAACAGTTTAATCGAGCAACTCAAAGACGTTCTG GTAACTTTTTTAGAAAAAGAAACCTATTGCATCAGATAGGTCGTTATTTTGGTATTCCTAAGTATCCAGAGCAAGCTATT GAGAGTGATGATACTCGAATTAACCAATTATATATAGATGAACAAAGACGACAATTTTCTAGTACCCCAGTTATTCGAAC TCCAGATATAATTAATCCCTATAATCAATCTGTACTAACAGCTCCTCCCTCTGAGTCAACGCCTACTTTTGGTGGTAATT AG
Upstream 100 bases:
>100_bases ATTCCCTATTTCCCAAAATACTAACGATAAACTTTTTCTTGAGAATCTCCCTGCTATAATATCAACAATTTAGCAATAAT CTATGTCGTAATTAGAGTTT
Downstream 100 bases:
>100_bases TTCTTTGGGGGTTGGGGAGTAAGAAGTAGTTCTAGTAGTTACGAGGAATAATGATAACCAGTGAAAGGGGATGAATATTT ATAATTTATATTATTTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MAINWKSFSGTIIFCAIANLTSIQVAQGEHLEDTAGTYQPFAEQFNRATQRRSGNFFRKRNLLHQIGRYFGIPKYPEQAI ESDDTRINQLYIDEQRRQFSSTPVIRTPDIINPYNQSVLTAPPSESTPTFGGN
Sequences:
>Translated_133_residues MAINWKSFSGTIIFCAIANLTSIQVAQGEHLEDTAGTYQPFAEQFNRATQRRSGNFFRKRNLLHQIGRYFGIPKYPEQAI ESDDTRINQLYIDEQRRQFSSTPVIRTPDIINPYNQSVLTAPPSESTPTFGGN >Mature_132_residues AINWKSFSGTIIFCAIANLTSIQVAQGEHLEDTAGTYQPFAEQFNRATQRRSGNFFRKRNLLHQIGRYFGIPKYPEQAIE SDDTRINQLYIDEQRRQFSSTPVIRTPDIINPYNQSVLTAPPSESTPTFGGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15116; Mature: 14985
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAINWKSFSGTIIFCAIANLTSIQVAQGEHLEDTAGTYQPFAEQFNRATQRRSGNFFRKR CCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH NLLHQIGRYFGIPKYPEQAIESDDTRINQLYIDEQRRQFSSTPVIRTPDIINPYNQSVLT HHHHHHHHHCCCCCCCHHHHCCCCCCHHHHEECHHHHHHCCCCCEECCCCCCCCCCCEEE APPSESTPTFGGN CCCCCCCCCCCCC >Mature Secondary Structure AINWKSFSGTIIFCAIANLTSIQVAQGEHLEDTAGTYQPFAEQFNRATQRRSGNFFRKR CCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH NLLHQIGRYFGIPKYPEQAIESDDTRINQLYIDEQRRQFSSTPVIRTPDIINPYNQSVLT HHHHHHHHHCCCCCCCHHHHCCCCCCHHHHEECHHHHHHCCCCCEECCCCCCCCCCCEEE APPSESTPTFGGN CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA