Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476084

Identifier: 113476084

GI number: 113476084

Start: 3786683

End: 3787084

Strand: Reverse

Name: 113476084

Synonym: Tery_2460

Alternate gene names: NA

Gene position: 3787084-3786683 (Counterclockwise)

Preceding gene: 113476086

Following gene: 113476083

Centisome position: 48.86

GC content: 37.06

Gene sequence:

>402_bases
ATGGCCATAAATTGGAAAAGTTTCAGTGGCACTATTATTTTTTGTGCGATCGCGAACCTAACATCTATCCAGGTTGCTCA
AGGAGAACATCTAGAAGATACTGCTGGTACATATCAACCTTTTGCAGAACAGTTTAATCGAGCAACTCAAAGACGTTCTG
GTAACTTTTTTAGAAAAAGAAACCTATTGCATCAGATAGGTCGTTATTTTGGTATTCCTAAGTATCCAGAGCAAGCTATT
GAGAGTGATGATACTCGAATTAACCAATTATATATAGATGAACAAAGACGACAATTTTCTAGTACCCCAGTTATTCGAAC
TCCAGATATAATTAATCCCTATAATCAATCTGTACTAACAGCTCCTCCCTCTGAGTCAACGCCTACTTTTGGTGGTAATT
AG

Upstream 100 bases:

>100_bases
ATTCCCTATTTCCCAAAATACTAACGATAAACTTTTTCTTGAGAATCTCCCTGCTATAATATCAACAATTTAGCAATAAT
CTATGTCGTAATTAGAGTTT

Downstream 100 bases:

>100_bases
TTCTTTGGGGGTTGGGGAGTAAGAAGTAGTTCTAGTAGTTACGAGGAATAATGATAACCAGTGAAAGGGGATGAATATTT
ATAATTTATATTATTTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MAINWKSFSGTIIFCAIANLTSIQVAQGEHLEDTAGTYQPFAEQFNRATQRRSGNFFRKRNLLHQIGRYFGIPKYPEQAI
ESDDTRINQLYIDEQRRQFSSTPVIRTPDIINPYNQSVLTAPPSESTPTFGGN

Sequences:

>Translated_133_residues
MAINWKSFSGTIIFCAIANLTSIQVAQGEHLEDTAGTYQPFAEQFNRATQRRSGNFFRKRNLLHQIGRYFGIPKYPEQAI
ESDDTRINQLYIDEQRRQFSSTPVIRTPDIINPYNQSVLTAPPSESTPTFGGN
>Mature_132_residues
AINWKSFSGTIIFCAIANLTSIQVAQGEHLEDTAGTYQPFAEQFNRATQRRSGNFFRKRNLLHQIGRYFGIPKYPEQAIE
SDDTRINQLYIDEQRRQFSSTPVIRTPDIINPYNQSVLTAPPSESTPTFGGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15116; Mature: 14985

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINWKSFSGTIIFCAIANLTSIQVAQGEHLEDTAGTYQPFAEQFNRATQRRSGNFFRKR
CCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
NLLHQIGRYFGIPKYPEQAIESDDTRINQLYIDEQRRQFSSTPVIRTPDIINPYNQSVLT
HHHHHHHHHCCCCCCCHHHHCCCCCCHHHHEECHHHHHHCCCCCEECCCCCCCCCCCEEE
APPSESTPTFGGN
CCCCCCCCCCCCC
>Mature Secondary Structure 
AINWKSFSGTIIFCAIANLTSIQVAQGEHLEDTAGTYQPFAEQFNRATQRRSGNFFRKR
CCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
NLLHQIGRYFGIPKYPEQAIESDDTRINQLYIDEQRRQFSSTPVIRTPDIINPYNQSVLT
HHHHHHHHHCCCCCCCHHHHCCCCCCHHHHEECHHHHHHCCCCCEECCCCCCCCCCCEEE
APPSESTPTFGGN
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA