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The map label for this gene is ppdD [C]

Identifier: 113476018

GI number: 113476018

Start: 3692064

End: 3692606

Strand: Reverse

Name: ppdD [C]

Synonym: Tery_2388

Alternate gene names: 113476018

Gene position: 3692606-3692064 (Counterclockwise)

Preceding gene: 113476019

Following gene: 113476017

Centisome position: 47.65

GC content: 42.73

Gene sequence:

>543_bases
ATGAAAACTGAATTTAAGGCTAAGTTTTTACAGCACGTTGCTAAGAAAAGAAAAGAAGAGGGCTTTACCCTAATTGAATT
GTTGGTGGTTATTATCATTATCGGTATTTTGTCCGCCATTGCATTGCCCTCTTTCTTGAACCAAGCTAATAAGGCCAAGC
AGTCTGAAGCGAAGCAATATATAGCTTCTATAGCTAAGGGCCAGCAGGCTTATTATGCAGAGAAAGGTACGTTTATAACT
GCCATAGCCGACATAGGTAAGCTTGGCCTAGGTATCAGAACTGGAACTAACAATTACACATATGAACTTGTAGGAACTAC
AGCCGGCGCAGGTGGAGTAAATGCTTGGACCAAAAACGCTGCACAGGGTTTGAAATATTATGCTGGTCTAATATATCTGA
CTCAAGCATCTGGAGCCCTGACTTCCGAAACCGCCCTTTGTGAGAGTGGGGATCAATCAAAAGATGCCGCAACTAATCAA
ACCGCTCCTACTGCTACTGCAACTAAATGTGCTGATACAGGAGGCTTCACAGTGTCCTTATAG

Upstream 100 bases:

>100_bases
AAAAAAAAAATTCTTGGAAGGTGATATGAAATTTGATCAATGTGGGTATGTTAGATTCAAGAAAACAAAATGTTAACCTA
AAACCTTATTAGGAGAAAAA

Downstream 100 bases:

>100_bases
TCTCTGGCATAATCTTCAGACTTGTTTGTATCCGCTCTAAAAGGCTGAAACCTGTACTTTTTTCAAAGACTGAGAATTTT
AACTCATTAGGTTGGTTTAC

Product: PHA accumulation regulator DNA-binding-like protein

Products: NA

Alternate protein names: Protein Kinase Domain; Prokaryotic N-Terminal Methylation Motif Domain Protein; General Secretion Pathway Protein G

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKTEFKAKFLQHVAKKRKEEGFTLIELLVVIIIIGILSAIALPSFLNQANKAKQSEAKQYIASIAKGQQAYYAEKGTFIT
AIADIGKLGLGIRTGTNNYTYELVGTTAGAGGVNAWTKNAAQGLKYYAGLIYLTQASGALTSETALCESGDQSKDAATNQ
TAPTATATKCADTGGFTVSL

Sequences:

>Translated_180_residues
MKTEFKAKFLQHVAKKRKEEGFTLIELLVVIIIIGILSAIALPSFLNQANKAKQSEAKQYIASIAKGQQAYYAEKGTFIT
AIADIGKLGLGIRTGTNNYTYELVGTTAGAGGVNAWTKNAAQGLKYYAGLIYLTQASGALTSETALCESGDQSKDAATNQ
TAPTATATKCADTGGFTVSL
>Mature_180_residues
MKTEFKAKFLQHVAKKRKEEGFTLIELLVVIIIIGILSAIALPSFLNQANKAKQSEAKQYIASIAKGQQAYYAEKGTFIT
AIADIGKLGLGIRTGTNNYTYELVGTTAGAGGVNAWTKNAAQGLKYYAGLIYLTQASGALTSETALCESGDQSKDAATNQ
TAPTATATKCADTGGFTVSL

Specific function: Not Yet Known. [C]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18940; Mature: 18940

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTEFKAKFLQHVAKKRKEEGFTLIELLVVIIIIGILSAIALPSFLNQANKAKQSEAKQY
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IASIAKGQQAYYAEKGTFITAIADIGKLGLGIRTGTNNYTYELVGTTAGAGGVNAWTKNA
HHHHHCCCHHHHHCCCCEEHHHHHHHHHCCEEEECCCCEEEEEEECCCCCCCCHHHHHHH
AQGLKYYAGLIYLTQASGALTSETALCESGDQSKDAATNQTAPTATATKCADTGGFTVSL
HHHHHHHHHHHEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEC
>Mature Secondary Structure
MKTEFKAKFLQHVAKKRKEEGFTLIELLVVIIIIGILSAIALPSFLNQANKAKQSEAKQY
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IASIAKGQQAYYAEKGTFITAIADIGKLGLGIRTGTNNYTYELVGTTAGAGGVNAWTKNA
HHHHHCCCHHHHHCCCCEEHHHHHHHHHCCEEEECCCCEEEEEEECCCCCCCCHHHHHHH
AQGLKYYAGLIYLTQASGALTSETALCESGDQSKDAATNQTAPTATATKCADTGGFTVSL
HHHHHHHHHHHEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA