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The map label for this gene is yugF [H]

Identifier: 113475950

GI number: 113475950

Start: 3585331

End: 3586143

Strand: Reverse

Name: yugF [H]

Synonym: Tery_2314

Alternate gene names: 113475950

Gene position: 3586143-3585331 (Counterclockwise)

Preceding gene: 113475951

Following gene: 113475945

Centisome position: 46.27

GC content: 37.39

Gene sequence:

>813_bases
ATGTTCCCATTATCAACACTACATTTTCAACTCAAAGGAAAAGGTTTTCCTATTCTTTGTCTTCACGGACATCCAGGTAA
TAGTCAATGTATGTCAGTCTTTACTAACTCTTTGTGCCAAAACTTTCAAACCATTGCTCCAGACTTAAGAGGATATGGGA
AAAGTTCTACGAAAACCAACTTTGAAATTACTCAACATTTAATAGACTTAGAAACACTTCTGGAACAACTTCAAATTTCT
AGATATTTAATATTAGGATGGTCTTTAGGTGGAATTATTGGCATGGAGTTAGCTCTGAGAAACCCTGAGCAAGTCGCAGG
TTTAATTTTAATAGCTACAGCTGCCAGGCCTCGAAGTAATCATCCGCCGATAACTTGGCAGGATAATCTTTATACAGGTT
TAGCGGGGGTCATAAATTATTTTTTACCTGGTTGGCAATGGAATATTGATACTTTTGGCAAGCGATCGCTATTTAGATAT
CTCATCCAACACCATACTCCTGCTACCTATAAATATTTAGCAAAAGAAGCAGTTTCGGCTTATTTACAAACTTCAAGATT
TGCTACTAAAGCCTTGAATAAAGCTTTAAGAGGTGGTTATAACAGATTAACTGAGTTAAGCAAGATTCAATCTCCTTGCT
TAGTATTAGCTGGGGCAGGCGATCGGCATATTACTCTATCGTCAAGTCAAGAAACTGCCCTTCACCTCAAAAATGCTACT
TGGCAATGCTATCCTAACACAGCGCATTTATTTCCTTGGGAAATTCCTCACCAAGTTATAACAGATATCAAAAACTGGGT
AGAGTTAGTGTGA

Upstream 100 bases:

>100_bases
ATATCTACTGTCAAGGATAAGTGTGAATATTGTTGAACTTTTTAATTATTTGATTTAACGGAGACTGAGGTCAAGTATTT
TAGGTGGCAAAATAAGATTT

Downstream 100 bases:

>100_bases
TTCGTTTGGCCTAAGTCAACCCTAATGGTTTTCGTTTAGACAGCCCTTAAAATGGTAATTATAGTACCTCACGGGATGAC
AAAGTAGCTGAAGTAGTTAG

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MFPLSTLHFQLKGKGFPILCLHGHPGNSQCMSVFTNSLCQNFQTIAPDLRGYGKSSTKTNFEITQHLIDLETLLEQLQIS
RYLILGWSLGGIIGMELALRNPEQVAGLILIATAARPRSNHPPITWQDNLYTGLAGVINYFLPGWQWNIDTFGKRSLFRY
LIQHHTPATYKYLAKEAVSAYLQTSRFATKALNKALRGGYNRLTELSKIQSPCLVLAGAGDRHITLSSSQETALHLKNAT
WQCYPNTAHLFPWEIPHQVITDIKNWVELV

Sequences:

>Translated_270_residues
MFPLSTLHFQLKGKGFPILCLHGHPGNSQCMSVFTNSLCQNFQTIAPDLRGYGKSSTKTNFEITQHLIDLETLLEQLQIS
RYLILGWSLGGIIGMELALRNPEQVAGLILIATAARPRSNHPPITWQDNLYTGLAGVINYFLPGWQWNIDTFGKRSLFRY
LIQHHTPATYKYLAKEAVSAYLQTSRFATKALNKALRGGYNRLTELSKIQSPCLVLAGAGDRHITLSSSQETALHLKNAT
WQCYPNTAHLFPWEIPHQVITDIKNWVELV
>Mature_270_residues
MFPLSTLHFQLKGKGFPILCLHGHPGNSQCMSVFTNSLCQNFQTIAPDLRGYGKSSTKTNFEITQHLIDLETLLEQLQIS
RYLILGWSLGGIIGMELALRNPEQVAGLILIATAARPRSNHPPITWQDNLYTGLAGVINYFLPGWQWNIDTFGKRSLFRY
LIQHHTPATYKYLAKEAVSAYLQTSRFATKALNKALRGGYNRLTELSKIQSPCLVLAGAGDRHITLSSSQETALHLKNAT
WQCYPNTAHLFPWEIPHQVITDIKNWVELV

Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 30403; Mature: 30403

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPLSTLHFQLKGKGFPILCLHGHPGNSQCMSVFTNSLCQNFQTIAPDLRGYGKSSTKTN
CCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCH
FEITQHLIDLETLLEQLQISRYLILGWSLGGIIGMELALRNPEQVAGLILIATAARPRSN
HHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHCCCHHHHHEEEEEEECCCCCCC
HPPITWQDNLYTGLAGVINYFLPGWQWNIDTFGKRSLFRYLIQHHTPATYKYLAKEAVSA
CCCEEECCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
YLQTSRFATKALNKALRGGYNRLTELSKIQSPCLVLAGAGDRHITLSSSQETALHLKNAT
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCEEEEECCE
WQCYPNTAHLFPWEIPHQVITDIKNWVELV
EEEECCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFPLSTLHFQLKGKGFPILCLHGHPGNSQCMSVFTNSLCQNFQTIAPDLRGYGKSSTKTN
CCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCH
FEITQHLIDLETLLEQLQISRYLILGWSLGGIIGMELALRNPEQVAGLILIATAARPRSN
HHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHCCCHHHHHEEEEEEECCCCCCC
HPPITWQDNLYTGLAGVINYFLPGWQWNIDTFGKRSLFRYLIQHHTPATYKYLAKEAVSA
CCCEEECCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
YLQTSRFATKALNKALRGGYNRLTELSKIQSPCLVLAGAGDRHITLSSSQETALHLKNAT
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCEEEEECCE
WQCYPNTAHLFPWEIPHQVITDIKNWVELV
EEEECCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]